Triticum urartu (red wild einkorn wheat): 125509281
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Entry
125509281 CDS
T08232
Name
(RefSeq) DNA mismatch repair protein MSH6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
125509281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tua03400
]
125509281
DNA repair and recombination proteins [BR:
tua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
125509281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PTM_DIR17_Tudor
Tudor_KDM3B
Agenet
LBR_tudor
Motif
Other DBs
NCBI-GeneID:
125509281
NCBI-ProteinID:
XP_048530165
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Position
5:complement(401529966..401541702)
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AA seq
1319 aa
AA seq
DB search
MASRRLSNGRSPLVRKQSQLTAFFASTPKPAAEPSPSSLNPKARKPPLVVPSPSPSPAAS
IPKPAAEPSPSPLNPKARKPPLAVPSPPPPKPSPPPQPQQEKKHDAAAAPAGEAVGRRLR
VYWPLDDAWYEGTVDAYDGGSRRHRVKYDDGEEEEVDLVKEKFEWAAEEATPPPARKLRR
LRRMSDTAKAKSPSAQEHEETGDSTEDEDWKKDAAPEDDSDGEEVELDDEEEEVVAVSSR
KGKSRNSLSTSASVSTVRSTSGLGSASSGSTLSKKRKQVDVGALDCAKKFSFQLANTPEK
AEMKVPPSCDTRERILENAHLALTGDLSERFGSRQMEKFTFLGQGRKDAKGRRPADPAYD
PRTLFLPPQFLKNLTGGQRQWWEFKSQHMDKVLFFKMGKFYELYEMDAHVGAKELDLQYM
KGDQPHCGFPEKNLAVNLEKLAQKGYRVLVVEQTETPDQLELRRRETGTKDKVVRREICA
MVTKGTLTEGESLLANPDTSYILSVAESYPCNSTKSQDGHTIGVCIIDVSTSKFIIGQFQ
DDPERHVLCSILSEIRPVEIIKPAKMLSAETERALKNNTRDPLINALLPSTEFWDAEKTI
QVIEQYYSSSDNLTASRNTVGVQNNVGCLPDLLSELIEAGDRAYALSALGGSLFYLKQVL
LDDKLLPCAEFEPLTCSGLINNMRKHMILDAAALENLEILENATGGLSGTLYEQLNHCVT
GFGKRLLKRWIVRPLYDCKAILQRQGAIAIFKGVGHECAMQFRKDLCRLPDMERLLAHLF
SRCGENGRSKSVVLYEDTAKRLLQQFTAALRGCQQMFQACSSIRALTGTEGSSLLNDLLS
PGKGLPDVSSVLDYFRDAFDWSEADHNGRIIPLEGCDPEYDATSCAIEEIESSLQEYLKE
QRKLLRDSSVKYVNVGKDTYLIEVSESLRGSVPSDYELQSTKKGVCRYWTPEVKQLISEL
SKVATDKESILKGILQKLIQRFIEHHSKWRQLVSVSAEIDVLVSLSIAGDYFEGPTCCPT
IRELCGPDDTPTFHARNLGHPIIRSDSLSMGSFVPNNINMGGPGNASFIVLTGPNMGGKS
TLLRQVCLTIILAQIGANVPAENLELSLVDRIFVRMGARDHIMAGKSTFLVELMETASVL
SSATKNSLVALDELGRGTSTSDGQAIAASVLDYLVHRVQCLGLFSTHYHKLAVEHEDSKV
SLCHMACQVGTGEGGLEEVTFLYRLTAGSCPKSYGVNVARLAGIPASVLQRANEKSIDFE
ANYGKRRCATKDKAICTQEDNFATIKDLFCVVKAGNHQEDQATSLSRIREVQMRAREIA
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcccgccgcctcagcaacggccgctcccctctcgtccggaagcagagccagctc
accgccttcttcgcctccaccccgaagcccgccgcagagccctccccgtcgtcgctgaac
cctaaggcgaggaagccccctctcgtcgtgccatccccttccccttcccccgccgcctcc
atccctaagcccgccgcagaaccctccccgtcgccgctgaaccctaaggcgaggaagccc
cctctcgccgtgccctcccctcccccaccaaagccgtctccgccgccgcagccgcagcag
gagaagaagcatgatgcagcggcggcgcctgcgggagaggcggtggggcggcggctgcgg
gtgtactggccgctggacgacgcgtggtacgagggcacggtggatgcctacgacgggggc
tcccgccggcaccgcgtgaagtacgacgacggggaggaggaggaggtcgacctcgtcaag
gagaaattcgagtgggccgccgaggaggcgacgccgcccccggccaggaagctgcggcgt
cttcggaggatgtctgacaccgcaaaggcgaagtcgccgtctgcgcaggagcatgaggaa
actggggattccactgaggacgaggactggaagaaggatgctgctccggaggatgattct
gatggggaggaggtggagttggatgacgaagaggaagaggttgttgcggtcagttcgcga
aaggggaaatcaaggaactccttgtccacgtcagcttcagtgtccacagtgcggtcaacg
tctggtcttggctcagcatcatcagggtcaacgttgtcaaagaagaggaaacaagtggat
gttggtgcattggattgtgctaagaagttcagctttcaactagctaacacccctgaaaag
gctgaaatgaaggtgccaccgagctgtgatacgagagagaggattttagagaatgctcac
cttgctcttactggagacctgtctgagcgctttggaagtcggcagatggagaagttcaca
ttccttgggcaggggcgcaaagatgcaaaagggagacgacctgcagacccagcctatgat
ccaagaactctcttcttgcctccccagttcttgaagaacttgacaggtggacagaggcaa
tggtgggaatttaaatcccagcacatggataaggtcctgttcttcaagatgggcaaattc
tatgaattgtacgagatggatgctcatgttggggccaaggagcttgatcttcaatacatg
aagggtgaccaacctcactgtggcttcccagagaagaatttagcagtgaatttggagaaa
ctagctcagaagggttatcgcgttctggttgtagagcagaccgagacgccagaccagctt
gaacttcgccgtagagagacgggtacaaaagacaaggttgtgaggcgtgaaatatgtgca
atggtcacaaaaggaacactgacagaaggagaatcccttctggcgaatccagatacgtca
tacatcttgtccgtggctgaaagttatccatgtaattcaacaaagagtcaagatggtcat
acaattggtgtttgcataattgatgtttctacaagcaaattcatcattggacagtttcaa
gatgaccctgaacgtcatgtgctatgttccattttgtctgaaatacgacctgtggaaatc
ataaagccagctaagatgctgagtgcagaaactgagagggcactgaaaaacaatacaaga
gaccctttgataaatgctttgcttccatctacggaattttgggatgcagagaaaactatt
caggtaatagagcaatactacagctcatcagataatctcactgcgtcacgaaacactgtt
ggtgtacaaaacaatgtgggctgtctgcctgacctattaagtgagctaattgaagctggt
gatcgagcgtatgcgctttctgctcttggaggttctttgttttacttaaagcaagtcctt
ctggatgacaaattgcttccatgtgctgaatttgagcccctgacatgctcggggctcatc
aacaatatgcggaagcatatgatacttgatgctgccgcactggaaaatttggagatccta
gagaatgcaactggtggtctctcagggaccttgtatgaacaattgaatcattgtgttact
ggatttgggaaaagattgctcaaacggtggattgtaaggcctttgtatgattgcaaagca
atactacagcgtcaaggtgccattgctattttcaagggagtcgggcatgaatgtgctatg
cagttccgtaaagatttatgtaggcttccagacatggagcgtctgcttgcacaccttttc
tctagatgtggtgaaaatgggagatctaagtcagttgttctatatgaagacacagcaaag
agactgctccagcagttcactgctgcccttcgtggttgccagcaaatgtttcaggcatgt
tcttctattagggcgttgacaggcacagaggggtcttctctactaaatgatttgctttca
ccaggcaaagggttaccagatgtgtcatctgttttagattacttcagggatgcatttgat
tggtcagaggctgatcataatggtcggatcatacctcttgaaggttgtgaccctgaatat
gatgccacttcctgtgccatagaggagatcgaatccagtctacaggagtacctgaaggag
caaagaaagctactgagggattcatcggttaagtatgtaaatgttggaaaggatacttac
cttattgaagtgtctgagagcctgaggggttctgttcctagtgactatgagttgcagtct
acaaaaaagggtgtctgccggtactggacaccagaagtaaaacaactaatatcagaactt
tctaaggttgcaacggataaagaatcaatattgaaaggcattcttcagaaactgattcaa
cgctttattgagcatcacagcaagtggagacagttggtgtctgtgtctgctgagattgat
gttttggttagtctttctattgcgggtgattattttgaggggccaacatgctgtccaact
atcagagaattgtgtggtccagatgatactcctactttccatgcaagaaatcttgggcat
cccattattcgaagtgattcgttaagcatgggttcatttgtaccaaataacattaacatg
ggtgggccaggaaatgccagctttattgttcttactggtccaaatatgggtggtaaatca
actctcctgcgtcaagtttgtcttaccataatattggcacagattggagcaaatgttccg
gcggaaaaccttgagctttctcttgttgaccgtatctttgttcgcatgggagcaagggat
catattatggctggaaaaagtacattcttggtggagctcatggagactgcttccgtgctt
tcgtcagctaccaagaattctcttgtggctttagatgagcttgggcggggcacatcgact
tctgatggacaagctattgcggcatctgttctagattatctagttcatcgtgtgcagtgt
ctaggcttgttttctacccactaccataagttagcagtggaacatgaggatagcaaggta
tcactttgccatatggcatgccaagtaggcactggagaaggaggtttggaagaagtgact
ttcctttacagattaacagctggttcatgtcccaaaagctatggcgtgaatgttgctcga
ttagcaggaatacctgcatcagtgcttcaaagggctaatgagaagtcaattgactttgag
gctaattatgggaaacgccgctgtgcaactaaagataaagcgatctgtacacaggaggat
aactttgctaccattaaggatttgttctgtgttgtgaaggcagggaatcatcaagaagat
caggcaacaagcttaagcaggattcgtgaagtacagatgcgtgccagggagattgcatga
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