Triticum urartu (red wild einkorn wheat): 125509988
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Entry
125509988 CDS
T08232
Name
(RefSeq) probable NOT transcription complex subunit VIP2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125509988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125509988
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125509988
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125509988
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
125509988
NCBI-ProteinID:
XP_048531025
LinkDB
All DBs
Position
5:480902540..480908252
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AA seq
454 aa
AA seq
DB search
MIKASLYFINRDSLVRVNDKEAYSVLFSFVELHVLTQLVVCFYLSLTPGSSQLINMIGNS
YPTSGGSLSQNQMQPGNNSLGSMGMLHDASDSTPFDINDFPQLTGRPNSAGGPQGQYGSL
RKQGVGVNSIVQQNQEFSIQNEDFPALPGFKGSSSDYAMELNHTEQLHENVPVMQGQQYP
MARSVGFNLGNSYQPNRQQHLQGANSIQSAGPQNIGLRPLNSSSQTSNLGSYEQLLQQYQ
QPKAQSPFGLQQMSSATQPYGDHGLKPILGGRTPPDPYGLLGLLGVIRTNDPDLSSLALG
IDLTTLGLNLNSPDNLYKTFGSPFSNEPAKGDPEYPTPACYVAEQPPALQPMHFQKFQTL
ILFYIFYSMPKDEAQICAANELHNRGWFYHKEAQQWFTRIPNMEPIVKTPTYEQGSFAFF
HQGNWETVRKDNFVLHYELVEKRPSLPSASQIVR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgataaaagcttctttatattttatcaatcgtgatagtctcgtgagggtgaatgataaa
gaagcatacagtgtgttattttcttttgttgaactccatgttctcactcagcttgttgtt
tgtttttatttatctctaacaccaggatcatcacaactgatcaatatgattggtaattca
tacccaacgtctggaggttcattatcccagaaccaaatgcaaccaggaaataattctcta
ggttccatggggatgctacatgacgccagtgacagcactccattcgacatcaatgatttc
ccccaattgactggtcgacctaattcagctggtggtccgcaaggacaatatggatcacta
cggaagcaaggagttggtgttaactccattgttcaacaaaaccaggagttcagtattcag
aacgaagatttcccggctttgccaggatttaaaggtagcagttcagattatgctatggag
ttaaatcacacggaacaacttcacgagaatgtacctgtaatgcaaggacaacaatatccc
atggcaaggtccgttgggtttaatttaggaaatagctaccaaccaaatcgtcagcaacat
ctgcagggtgctaattcaattcagagcgccggacctcaaaatattggactaagaccacta
aactcttcgagtcaaacttctaatttgggatcatacgagcaactgctccagcaataccag
cagccgaaggctcagagtcctttcgggttgcagcagatgtcttcagccacacagccatat
ggggatcatggtctaaagcccattctgggaggccgaacaccacctgatccatacggcttg
ttgggattgctgggagttataaggacgaatgatcctgatttgtcatctcttgctttggga
atagatttgacaacgttgggtttgaatttgaactcaccagacaatctgtacaagacattt
ggctctccattttcaaatgagccagcaaaaggagatccagaatatcctactccagcttgt
tatgtggctgagcaacccccagcactacagcctatgcattttcagaaatttcagacactc
atactgttttacatattctacagcatgccgaaggatgaagctcaaatatgtgctgccaat
gaactacataatcgtggatggttttaccataaagaagcgcagcaatggttcacaagaatt
cccaacatggagcctattgtcaaaactcctacatatgaacaggggtcttttgccttcttt
catcaaggcaattgggaaacagtccgtaaggataactttgttctccattatgagctagta
gagaaaaggcctagtctcccttccgcgtcccaaattgttaggtga
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