Triticum urartu (red wild einkorn wheat): 125510512
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Entry
125510512 CDS
T08232
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2 isoform X1
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03020
RNA polymerase
tua03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125510512
09124 Replication and repair
03420 Nucleotide excision repair
125510512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tua03021
]
125510512
03400 DNA repair and recombination proteins [BR:
tua03400
]
125510512
Enzymes [BR:
tua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125510512
Transcription machinery [BR:
tua03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
125510512
DNA repair and recombination proteins [BR:
tua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
125510512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
125510512
NCBI-ProteinID:
XP_048531676
LinkDB
All DBs
Position
5:538905301..538913335
Genome browser
AA seq
1277 aa
AA seq
DB search
MEDDEYEEGMEMDMGGHQHLQHRGYGAEEEVEGGYAGGGDGEDEEEEARDEEEITQEDAW
AVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAEFAETLHK
ISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVVKKGHDCEEVTET
AEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFVINGSEKVLIAQEKMS
TNHVYVFKKRQPNKFAYVGEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQYIRATLPY
IRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDYIG
KRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMCALGRRAE
DDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAIKAKTITS
GLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHN
SHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEISPAVIPQ
AAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTDYGRCSRP
LFIVENQRLLIKKKHIRALQQRETPDEGWHDLVAKGFIEYIDTEEEETTMISMTIRDLET
SRHNPGEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNY
QLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSS
IDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRESTMGMRHGSYDKLDDDGLAPPGTRV
SGEDVIIGKTSPIPQDDAQGQATRYSKRDHSTSLRHSESGMVDQVLLTTNADGLRFVKVR
MRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNPHAIPSRMTIGQLI
ECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRKLTAMIFL
GPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAFFL
KERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELM
AMAIAPRMLTHEVKGARDKHRCASSVVFGCLTGTVFRGALLRNLRTIILLIVFWIRQIPG
PDIKLLRFFMSTLVFIY
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgacgagtatgaggaggggatggagatggatatgggagggcaccagcacctc
cagcaccgggggtacggagctgaggaggaggtcgaggggggatacgccggcggcggggac
ggggaggacgaggaggaggaggcgcgggacgaggaggagattacccaggaggacgcctgg
gccgtcatctccgcctacttcgaggagaagggcctcgtgcgccagcagctcgactccttc
gacgagttcatccagaacaccatgcaggagatcgtcgatgagtcggccgacatcgagatc
cgccccgagtcgcagcacaaccccggccgccaggccgagttcgccgagacactccacaag
atcagctttggtcaaatctatctgagcaaaccaatgatgactgaagctgatggagagact
gctaccttattccccaaatcagcaaggctcaggaatctgacatactcagcaccactttat
gtagatgtatcatacagagttgtaaagaaaggacatgactgtgaagaagttacagaaact
gcggagtatccgaaagtcttcattggaaaggtcccaatcatgctgcgttctagttactgc
acactgtttcaacaatcggaaaaggatctcacagaacttggagagtgcccttatgaccaa
ggaggatattttgtaatcaacggtagtgaaaaggttctcattgcccaggagaagatgagc
accaaccatgtctatgtgtttaagaagaggcaaccaaataagtttgcatatgtgggtgaa
gtccgttcaatggcagagaaccagaacagacctgctagtagcatgtttgttcggatgctt
tcccgagcaggcgcgaaagggggttcatctggtcaatatatccgtgctactctgccctac
attcgtgcagatattcccatcatcattgtgtttagagcactaggatttgtcgctgacaaa
gatatactggagcacatatgctacgatttctccgatacacaaatgatggaattgctgcgc
ccatctttggaggaagcttttgtcattcaaaatcagcaggttgctcttgactacattgga
aaacgaggtgctacagttggtgtaactcgagaaaaaagaataaagtatgcgaaagagata
cttcaaaaggaaatgctgccccatgttggtgtaggtgaattctgtgaaactaaaaaggca
tactacttcgggtatattattcaccgactattgatgtgtgctcttggtcgaagagctgaa
gatgacagagatcattacggcaacaaaaggcttgaccttgcaggtccattgcttggagga
ctgttcagaatgcttttcaggaagttgacgagggatgtgaggtcatatgttcagaagtgt
gttgataatgggaaggaagttaatttgcaatttgctattaaagctaaaaccattactagt
ggattgaagtattcccttgctactggaaactggggacaggctaaccaagctggtacaaga
gccggtgtgtctcaggtgcttaatcgccttacgtatgcttctacattatcacatcttcgg
aggttgaactctcccattgggcgtgaagggaaactggcaaaacctcgccaattgcataat
tctcattggggaatgatgtgccctgctgaaactcctgaaggacaggcttgtggcttggtt
aaaaatcttgccttgatggtttatatcactgttggttctgctgcaaatcctattttggaa
tttttggaagaatggggcacagaaaattttgaggagatatcaccggcagtcattcctcaa
gctgctaaaatatttgtgaatggttgttgggttggaattcataggaatcctgacctattg
gtgaagacccttcgtcgtttaagaagacagattgatgtcaacactgaagttggtgtcgtt
cgtgatatccgtcttaaagaacttcgactctatactgattacgggcgttgcagtcgcccg
ctgtttatcgttgaaaaccagaggcttctaattaagaagaaacatatccgagcattgcag
caaagggagactcctgatgaaggttggcatgacttggttgccaaaggatttatagagtac
atagatactgaagaggaagaaactactatgatctctatgactatacgtgaccttgaaact
tcgaggcataatccaggggaggcatattctgagacttatacgcactgtgagattcaccct
tcattgatacttggtgtgtgtgcgtcaattattccttttcctgatcacaaccagtcacct
cgtaatacatatcagtctgctatgggaaagcaagccatgggaatctatgttaccaactat
cagttaagaatggacacattggcctacgttctgtactacccacaaaagcctcttgttact
actcgtgctatggagcatttgcacttcaggcagttaccagctggcattaatgcaattgtt
gccattgcatgctactctggatataaccaagaagattcggttattatgaaccaatcttca
atagatcgtgggttcttcagatcactttttttccgctcttacagagatgaggaaaagaag
atggggactcttgtcaaagaggaatttggtcgtccaaatagggagagcactatgggaatg
cggcatgggtcttatgataaattagatgatgatggccttgcaccaccgggaacaagggtc
tctggggaagatgtcattattgggaagacgtctccaattccacaagatgatgctcaaggg
caagctactagatactcaaagcgtgatcatagtacttctctgcgtcacagtgaaagtggg
atggtggatcaggttctgttgacaacgaatgctgatggtttaagatttgtcaaggttaga
atgcgatcagtgcgcataccacaaataggagataagttcagcagtaggcatggtcagaag
ggaactgttggaatgacttacacacaagaggacatgccatggacaatcgaaggcatcaca
ccggatatcattgtgaatccacatgctattccatcccgtatgactattggccagctgatt
gagtgtattatgggtaaagtcgcggctcacatgggaaaggaaggagatgcaactcctttc
actgatgttactgtggataatatcagtaaagcactgcacaagtgtggctatcagatgcgt
ggatttgagaccatgtacaatggtcatactgggagaaaattgactgcaatgattttctta
ggtccaacttactaccagagacttaagcatatggtggatgacaaaattcactctagaggt
cgtggtcctgtccagatactgaccagacagccagcagaggggcgctcacgtgatggtggt
ctccgttttggagaaatggagagggattgcatgattgctcatggagctgcatttttcttg
aaggaaaggttatttgaccagagcgatgcttacagggtgcatgtttgtgagaagtgtgga
ctcattgccattgccaatctcaagaagaattccttcgaatgcagaggctgcaagaacaaa
acggacattgtccaggtccatataccgtacgcatgtaagctcctcttccaggagctcatg
gcgatggcgattgctcccaggatgctcacccatgaggtcaagggtgcgagggataagcac
cgttgtgcttcgagtgttgtattcgggtgcctgactggaactgttttccggggtgccttg
ttgcggaacttaagaactatcatccttctgattgtgttctggatacgtcagataccaggc
ccagacataaagttacttaggttctttatgagtacattagtattcatttactaa
DBGET
integrated database retrieval system
