Triticum urartu (red wild einkorn wheat): 125510523
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Entry
125510523 CDS
T08232
Name
(RefSeq) histone-binding protein MSI1 homolog
KO
K10752
histone-binding protein RBBP4
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03082
ATP-dependent chromatin remodeling
tua03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125510523
03083 Polycomb repressive complex
125510523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tua03036
]
125510523
Chromosome and associated proteins [BR:
tua03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
125510523
Histone modification proteins
HAT complexes
HATB complex
125510523
HDAC complexes
Sin3A-HDAC complex
125510523
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
125510523
PRC2.2
125510523
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
125510523
Heterochromatin formation proteins
Other heterochromatin formation proteins
125510523
Chromatin remodeling factors
NuRD complex
125510523
NuRF complex
125510523
NuRF complex (fruit fly)
125510523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
WD40_RFWD3
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD_LRWD1
eIF2A
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_HPS5
MIOS_WD40
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
125510523
NCBI-ProteinID:
XP_048531694
UniProt:
A0A8R7UMM4
LinkDB
All DBs
Position
5:539878132..539885272
Genome browser
AA seq
428 aa
AA seq
DB search
MPKAGGGDEEEFRAEVEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVQWLPDRTEP
AGKDHSVQKMVLGTHTSDNEPNYLMLAQVQLPLDDAEADARHYDDDHADIGGFGAASGKV
QIVQQINHDGEVNRARYMPQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLKG
HNSEGYGLSWSIFKEGHLLSGSDDAQICLWDITANGKNKTLDAYQIFKFHDGVVEDVAWH
LRHEYLFGSVGDDHHLLIWDMRTPAPTKPVQSVVAHQGEVNCLAFNPFNEWVVATGSTDK
TVKLFDLRKIDTSLHTFDCHKEEVFQVGWSPKNETILASCCLGRRLMVWDLSRIDQEQTP
EDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVLASVAEDNILQIWQMAENIYHDEDDLP
SDEPAKAS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggccggcggcggggacgaggaggagttccgcgccgaggtggaggagcggctg
atcaacgaggagtacaagatctggaagaagaacacgcccttcctctacgacctcgtcatc
acccacgcgctcgaatggccctcgctcaccgtgcagtggctgcccgaccgcaccgagccc
gccggcaaggaccactccgtgcagaagatggtgctcgggacccacacctccgacaacgag
cccaactacctcatgctcgcccaggtccagctccccctcgacgacgccgaggccgacgcg
cgccactacgacgacgaccacgccgacatcggcggcttcggggccgcatccggcaaggtg
caaatagttcaacagataaatcatgatggagaagtcaatcgagctcgatatatgccccaa
aattcatttattattgctaccaagacagtcagtgcagaagtgtatgtctttgattatagc
aagcacccatcaaagcctccactagatggtgcgtgcaatcctgatttacggctgaaggga
cacaactctgaaggatatggcctgtcttggagtatctttaaagagggtcatttgctgagt
ggatcggatgatgctcaaatctgcttatgggacatcacagcaaatggtaaaaataaaact
ctcgacgcataccagatttttaagtttcatgatggcgtcgttgaagatgttgcttggcat
ttgaggcatgaatacttattcggctcagttggtgatgatcatcatctcctaatttgggat
atgcgtactcctgcacctaccaagcctgtacagtctgtggtggcacaccagggtgaggtg
aattgcctggctttcaatcctttcaatgaatgggttgttgcaactggttcaaccgacaag
actgtcaaattatttgatcttcggaagattgatacttcgctgcacacttttgactgtcac
aaagaggaagtatttcaagttggatggagcccaaagaatgaaactatacttgcatcttgt
tgtctgggaaggaggctgatggtttgggatctaagcagaattgatcaggagcaaacacca
gaggacgcggaggacggccctcctgagctcttgttcattcatggaggccacacaagcaaa
atctcagacttctcctggaacccgtgtgaggactgggtgcttgcaagcgttgctgaagac
aacatccttcagatatggcagatggcggagaacatctaccatgacgaggatgatcttccg
agtgatgagccggcaaaggcttcatga
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integrated database retrieval system
