Triticum urartu (red wild einkorn wheat): 125510607
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Entry
125510607 CDS
T08232
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125510607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125510607
03012 Translation factors [BR:
tua03012
]
125510607
Enzymes [BR:
tua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125510607
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125510607
Translation factors [BR:
tua03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
125510607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
nSTAND3
ATPase
T2SSE
AAA_19
ABC_tran
AAA_23
NACHT
ATPase_2
AAA_16
Myosin_head
Motif
Other DBs
NCBI-GeneID:
125510607
NCBI-ProteinID:
XP_048531790
UniProt:
A0A8R7QJR2
LinkDB
All DBs
Position
5:complement(551483152..551490144)
Genome browser
AA seq
1148 aa
AA seq
DB search
MRRVLRRGLGILLVPLPGPLSRPPPIPLAALLLLPRRLDAFFRRPFCDYSGGRAVEQFSD
DEYDHEYEDHRPSSSVANIDEWRWKLSMLQRNAEEQEIISRDRRDRRDYDQIANLAKRMG
LYSELYGKVIVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGFVQEHLDRSLLPFNK
DGGKSESGSEKAEHVNLDEKQDPLLDESVMEKILQRKSLRMRNFQRSWQESPEGAKMVEF
RKSLPAYKEKERLLAAIARNQVIVISGETGCGKTTQLPQFVLESEIESGRGAFCNIICTQ
PRRISAMAVAERVSTERGENLGESVGYKVRLEGIRGKDTHLLFCTSGILLRRLLSDRNLN
GVSHVFVDEIHERGMNEDFLLIVLKDLLSRRRDLRLILMSATLNAELFSSYFGGAPTIHI
PGFTHPVRAHFLEDILERTGYKMTASNQLDDYGQDKVWKTQRQLLPRKRKNQITTLVEDA
LQNSNFETYGSRTRDSLANWNPDCIGFNLIEAVLCHICRKERAGAVLVFMTGWDDISSLK
DQLKAHPLLGDPNRVLLLACHGSMATSEQRLIFDKAPPNVRKVVLATNMAEASITINDIV
FVMDCGKAKETTYDALNNTPCLLPSWISKASSRQRRGRAGRVQPGECYHLYPRCVYDAFA
EYQLPELLRTPLNSLCLQIKSLQVDSIGEFLSAALQPPEPRAVQNAVEFLKMIGSLDENE
NLTDLGRYLSMLPVDPKLGKMLIMGAVFRCIDPILTVVAGLSARDPFLLPQDKKDLAGTA
KSRFSAKDYSDHMALVRAYEGWKDAEREGSGYEYCWRNFLSAQTLQAIHSLRKQFSYILK
DAGLIDSDANTNNSLSHNQSLVRGVICSGLFPGISSVVHRENSMSFKTMDDGQVLVYANS
VNAKYQTIPYPWLVFGEKVKVNAVFIRDSTGVSDSILILFGGAVTKGSAAGHLKMLDGYI
DLFMDPSLSECYLQLKEELDKLVQKKLEDPTFDIHKEGKYILFAAQELAAGDLCEGRFVF
GRETSRARLRDNEDGKSNIIKDGMNPKSLLQTLLMRAGHTPPKYKTKHLKTNEFRAMVEF
KGMQFVGKPKRNKQVAERDAAIEALGWLTQTSGTKLQDEGDDSPLDLTDNMLKLLSRPRK
RTRNNPKK
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcgtcttgcggcgcgggctgggcatcctcctcgtcccactccctggcccactc
agccggccgccgccgatccctctcgctgctctcctcctcctcccgcgccgcctggatgcc
ttcttccgacggcccttctgcgactacagcgggggccgcgccgtcgagcagttctccgac
gacgagtacgaccacgagtacgaggaccaccggccgtcgtcgtcggtggcgaacatcgac
gagtggaggtggaagctgagcatgctgcagcgcaatgcggaggagcaggagatcatctcc
agggaccggagggaccgccgggactatgaccagatcgccaacctcgccaagaggatgggg
ctctacagtgagctgtatgggaaggttattgttgcgagcaaggtcccgctgccgaactac
aggccggacctggacgacaagcgcccgcaaagagaggtggtgatcccgctaagcttgcag
aggagggttgaaggatttgtgcaggagcaccttgaccgttcgctcttgccatttaataaa
gatggtggcaagtcagagagtggttctgagaaagctgagcatgtgaacttggatgagaag
caggatcctctgctcgacgagtcggttatggagaagatccttcagaggaagagtcttagg
atgcgcaattttcaaagaagttggcaggaatcacctgaaggcgctaagatggtagaattt
cggaaatcactcccagcatacaaggagaaggaaaggcttctagcagccattgcacgtaat
caggttatagttatttctggggagacagggtgtggaaaaacaacacagttgcctcaattt
gtgttggagtcagagatagaatctggtcgaggggccttttgtaacataatctgtacacag
ccacgaagaatatctgcaatggctgttgcagaaagagtatccaccgaaagaggagaaaac
cttggtgaatcggttggctacaaagttcgattggagggaattagaggaaaagatacacat
ttacttttctgcaccagtggtattctactaagacgattgctgagtgaccgaaacttgaat
ggagtatctcatgtatttgttgatgaaatacatgaaagagggatgaatgaagatttctta
ttgatcgttctaaaggacctattgtcacggcgccgcgatctaaggttgatattgatgagt
gctactttaaatgcggaactgttctcaagttatttcggaggagcgccaactatccacatt
cctggattcacacatccagtgagggcgcattttctggaagacatattagagaggacaggc
tataagatgacagcaagtaatcaacttgacgattacggccaagataaagtgtggaagact
cagagacagctattaccaagaaaaaggaaaaatcaaattactacacttgtcgaggatgcc
cttcaaaattcgaactttgaaacctatggctcaaggacacgtgattctctggcaaactgg
aatcctgattgcatagggtttaatctcatagaggctgttctgtgccacatatgtcgcaaa
gagcgagctggtgcagttttagtttttatgaccggatgggatgacattagctctttgaag
gatcaactaaaagcgcatccgttgctaggcgacccaaatagagtgttactgcttgcatgc
catggttccatggctacctctgagcagaggctaatatttgacaaggcacctcctaatgtt
cggaaggtagtacttgccactaacatggcagaggcaagtattaccataaatgacatcgtt
ttcgtcatggattgtggaaaagcaaaggaaaccacatacgatgctctaaacaacactccc
tgcttgctcccctcatggatttcaaaggcttcttcccgtcagaggaggggcagagctggt
cgtgtccaacctggagaatgctatcatctctacccccgatgtgtatatgatgcatttgca
gagtaccagcttccagagcttcttaggactcctttgaattcactatgtttgcagataaaa
agtttgcaggttgacagcattggggagtttctatcagctgctttgcagcctccagaacca
cgagccgtccaaaatgcagtggaattcctgaagatgatcggatcattagatgagaacgag
aaccttactgatctaggaagatacctctccatgcttccagttgatccgaagttggggaag
atgcttataatgggtgcagttttccgttgcattgaccctatacttactgtggttgctgga
ttgagtgcccgggatcctttcctgttgccacaggacaagaaagatttggcaggaactgca
aaatcaagattctcagcgaaagattatagtgatcatatggcccttgtacgagcttatgaa
ggatggaaggatgctgagagggaaggatctggttatgagtactgttggaggaatttcctt
tctgctcaaacactacaagccattcattctcttcgaaagcaattcagctatatcttgaag
gacgccggtttgatagactctgatgcaaatacaaataatagtttgagccataatcaatca
ttagttcgtggtgtaatttgttctggactttttcctgggatatcatctgttgtgcatagg
gaaaactccatgtccttcaagaccatggatgacggccaagttcttgtttatgctaactcc
gtgaatgctaagtaccagaccatcccttatccatggctggtctttggtgagaaggtgaag
gtaaatgctgtcttcatccgtgattcaactggagtatcagattccatactgatcttattt
ggtggtgctgttacaaaaggaagcgcggctgggcatttgaagatgcttgatggttacatt
gatctatttatggatcccagcctgtcagagtgctacttgcaacttaaagaggaacttgat
aaacttgtacagaagaagcttgaagacccaacctttgacattcacaaggaaggcaaatac
attttatttgctgcacaagagcttgctgcgggcgacctatgtgaaggaaggtttgtgttc
ggccgagaaacgagcagagctaggcttcgggacaacgaagacggcaaaagcaacatcata
aaggatggtatgaacccaaagagcctgctgcagaccttgctgatgagggcaggccacacg
cctccaaagtacaagacaaagcacctcaagaccaacgagttcagggccatggtggagttc
aaagggatgcagttcgtcgggaagccgaagaggaacaagcaggtcgcggagagggacgcc
gcgatagaagcgctgggatggttgacacagacgtccggtacgaagctccaggatgagggt
gacgactccccgctcgacctgaccgataacatgcttaagctgctttctagaccaaggaaa
cggacgagaaataacccgaagaaatga
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