Triticum urartu (red wild einkorn wheat): 125510903
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Entry
125510903 CDS
T08232
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03030
DNA replication
tua03410
Base excision repair
tua03420
Nucleotide excision repair
tua03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125510903
03410 Base excision repair
125510903
03420 Nucleotide excision repair
125510903
03430 Mismatch repair
125510903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tua03032
]
125510903
03036 Chromosome and associated proteins [BR:
tua03036
]
125510903
03400 DNA repair and recombination proteins [BR:
tua03400
]
125510903
DNA replication proteins [BR:
tua03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125510903
DNA Replication Termination Factors
ELG1-RFC complex
125510903
Chromosome and associated proteins [BR:
tua03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
125510903
DNA repair and recombination proteins [BR:
tua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125510903
Check point factors
HRAD17(Rad24)-RFC complex
125510903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
RuvB_N
Rad17
DUF815
Sigma54_activ_2
AAA_22
Mg_chelatase
AAA_5
AAA_16
AAA_11
nSTAND3
AAA_2
NPHP3_N
ABC_tran
AAA_24
AAA_29
DUF5906
FtsK_SpoIIIE
ATPase_2
RNA_helicase
TsaE
Motif
Other DBs
NCBI-GeneID:
125510903
NCBI-ProteinID:
XP_048532150
LinkDB
All DBs
Position
5:complement(578128732..578133165)
Genome browser
AA seq
354 aa
AA seq
DB search
MLWVDKHRPKTLDKVIVHEQVAQNLKKFVAEQDCPHLLFYGPPGSGKKTLIMALIKQMFG
AGVEKVKMENKTWKIDTGTRTFDLELAMLSSSHHVEMNPSDAGFQDRYVVQEVIKEMAKS
RPIDAKGKRAFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSR
CLNVRVNAPTEDQIVQVLEFIGKKENLQLPFGFAARIAAQSNRNLRRAILFFETCKVQQY
PFSANQVAPPLDWEQYVSEIATEILSEQSPKRLYSVRQKFYELLVNCIPPESILKKLLTE
LMKKLDSDLKHEVCHWAAHYEHKMRLGSKAIFHLEAFVAKFMSIYKEFLCAAFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgggtggacaagcaccggccgaaaaccctagacaaggtcatcgtccatgagcag
gtcgcgcagaacctcaagaaattcgtggcggagcaggactgcccgcacctgctcttctat
ggcccgccggggtccggcaagaaaaccctaatcatggcgctcatcaagcagatgttcggc
gccggtgtggagaaggtgaagatggagaataagacttggaagatcgataccgggacgagg
acatttgatctagagctggcgatgttgtcaagttcccaccatgtggaaatgaaccccagc
gatgctggctttcaggacaggtatgttgttcaggaggttatcaaagagatggccaagagt
aggccgattgatgccaagggcaagagagcatttaaagtgcttgtcctaaatgaagttgac
aagctgtcacgagaagcacaacattccctccgtaggacaatggagaaatacagtgcatcg
tgtagactcatattatgctgtaatagctcctcaaaggtgacagaagctgtaaggtcccgt
tgcttgaatgtgcgagtgaatgcacctaccgaagatcagattgtacaagtactggaattc
attgggaagaaagagaatctgcaacttccatttggatttgctgctcggatagcagctcaa
tcaaaccgcaacttgaggcgagcaatattattttttgagacatgcaaagtccagcaatat
ccattttcagcaaatcaagtggcgcctcctcttgactgggagcagtatgtgtctgaaata
gcaactgaaatcttgagtgaacaaagccctaaaaggctatattctgtacgccagaaattc
tatgagttacttgtgaattgtatcccacctgaaagcatcttgaagaagttgttaaccgag
ttaatgaagaagttagactctgatttgaagcatgaagtttgtcactgggctgcacactat
gaacacaagatgcgacttgggtcaaaggccatttttcatctggaagctttcgtggccaag
ttcatgagcatttacaaggagttcctttgtgccgcatttggttga
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