Triticum urartu (red wild einkorn wheat): 125511040
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Entry
125511040 CDS
T08232
Name
(RefSeq) squalene synthase 1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua00100
Steroid biosynthesis
tua00909
Sesquiterpenoid and triterpenoid biosynthesis
tua01100
Metabolic pathways
tua01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
125511040
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
125511040
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tua01006
]
125511040
Enzymes [BR:
tua01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
125511040
Prenyltransferases [BR:
tua01006
]
Terpene biosynthesis
Squalene/phytoene synthase
125511040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
125511040
NCBI-ProteinID:
XP_048532279
UniProt:
A0A8R7QKS7
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Position
5:592265700..592271302
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AA seq
404 aa
AA seq
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MGVLSRPEELPALLRLKLAAGRIRRQIPPQEHWAFAYDMLQRVSRSFALVIQQLGPELRN
AVCVFYLVLRALDTVEDDTAIPNEVKLPILRDFYRHIYNPDWLFSCGANDYRVLMDNFRQ
VSTAFLELGEGYQKAIEEITRRMGAGMAKFICTEVETIDDYDEYCHYVAGLVGYGLSRLF
HATGTEDLAPDHLSNSMGLFLQKTNIIRDYLEDINEIPRCRMFWPREIWSKYVDKLEDLK
YEENSEKAVQCLNDMVTNALIHAQDCLQYMSALKDNSNFRFCAIPQIMAIGTCAICYNNV
KVFRGVVKMRRGLTARVIDETKSISDVYSAFYEFSSLLESKIDDNDPNAALTRRRVDAIK
KTCKSSGLLKRRGYDVEKSMYRMPMLVMIVLLLVAIILGVLYGK
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgctgtcgcggccggaggagttgccggcgctgctcaggctcaagctggcggcg
gggcggatcaggcgccagatcccgccccaggagcactgggccttcgcctacgacatgctc
cagcgggtctcccgcagcttcgcgctcgtcatccagcagctcggcccagagctccgcaat
gccgtgtgcgtcttctacctcgtgctccgggccctggacaccgtcgaggacgacaccgcc
atccctaacgaggtcaagctgcccatccttcgggacttctaccgccacatctacaacccg
gactggcttttttcatgtggagcaaacgactacagagtgctcatggataattttagacaa
gtctccaccgctttcctggagctaggcgaaggataccaaaaggctattgaagaaatcact
aggcgaatgggagcaggaatggctaaatttatatgcacggaggttgaaaccattgatgac
tatgatgagtactgccactatgtagcagggctagtaggctatggactttctaggctcttt
catgctactggcacagaagatttggctccggatcatctttcaaattcaatgggtttattt
ctacagaaaaccaatataataagggattatttggaggacataaatgagataccaaggtgc
cgtatgttctggcctcgggaaatatggagtaaatatgttgataaacttgaggatttaaaa
tatgaggaaaattcagaaaaggccgtgcagtgcttgaatgatatggtgaccaatgctttg
atccatgcccaagattgccttcaatacatgtcagcattgaaggacaattccaattttcga
ttttgtgcaatacctcagataatggcaattgggacctgtgctatttgctacaataatgtg
aaagtctttagaggagttgttaagatgaggcgtgggctcactgcacgggtaattgatgag
accaaatcgatatcagatgtctattctgctttctatgaattctcttcattgctagagtcg
aagattgatgataacgacccaaatgctgcgctgacacggaggcgtgtggatgcaataaag
aaaacttgcaagtcatccggcctgctgaagagaaggggttatgatgtggagaaatcaatg
tacagaatgcctatgctggttatgattgtgcttctcttggtggctattatcttgggtgta
ctgtatggcaagtga
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