Triticum urartu (red wild einkorn wheat): 125511081
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Entry
125511081 CDS
T08232
Name
(RefSeq) RNA-binding protein Y14B-like isoform X1
KO
K12876
RNA-binding protein 8A
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03013
Nucleocytoplasmic transport
tua03015
mRNA surveillance pathway
tua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125511081
09122 Translation
03013 Nucleocytoplasmic transport
125511081
03015 mRNA surveillance pathway
125511081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125511081
03041 Spliceosome [BR:
tua03041
]
125511081
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125511081
Spliceosome [BR:
tua03041
]
Complex C
Other components
EJC/TREX
125511081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
Motif
Other DBs
NCBI-GeneID:
125511081
NCBI-ProteinID:
XP_048532316
UniProt:
A0A8R7UKK5
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All DBs
Position
5:complement(598008826..598012944)
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AA seq
218 aa
AA seq
DB search
MAAEDVEFVDYERDDGDEDDEGMEDEEEDGEVSARALPVPHIAAPAVPRTSRGRFVGRSR
SVIASTRDRFDSLPFAGTSAHGGPQRSIEGWIIIVSGVKEDAEESDLYDAFAEFGEVKDL
HLNLERRTGYGKGYALVEYGCFEEAQTAIRSMNGTQLLTKTIHVDWAFNRGPIQNVTSAR
CEQNVFCPAFPLVDKSLCQFDMILNLDHTLVTDSVFFV
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggacgtggagttcgtggactacgagcgggacgacggcgacgaggacgac
gaggggatggaggacgaggaggaggacggggaggtctcggcccgcgcgctccccgtgccc
cacatcgccgcccccgccgtgccgcgcaccagcaggggccgcttcgtcggccgcagccgc
tccgtcatcgcctccacccgcgaccgcttcgactccctccccttcgccggcacctccgcg
cacggcggcccgcagcgctcaattgaaggatggataataattgtctcaggagtcaaagaa
gatgcagaagaaagtgatctgtatgatgcttttgctgagtttggtgaggtcaaggacttg
catctcaacctggaacgccgcactggatatggcaagggatatgcattggttgaatatgga
tgttttgaggaagcacaaactgcaatcagaagtatgaatgggacacagctgttaacaaag
accatccatgttgattgggcattcaacagaggtcctatacagaacgtcacaagtgcacgg
tgcgaacaaaacgtgttttgtcctgcatttcctctggttgataaatctttatgccaattt
gatatgatacttaatttggaccacacgcttgttactgacagtgtcttctttgtgtaa
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