Triticum urartu (red wild einkorn wheat): 125512409
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Entry
125512409 CDS
T08232
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125512409
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tua01009
]
125512409
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125512409
03036 Chromosome and associated proteins [BR:
tua03036
]
125512409
Protein phosphatases and associated proteins [BR:
tua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
125512409
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
125512409
Chromosome and associated proteins [BR:
tua03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
125512409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
125512409
NCBI-ProteinID:
XP_048533461
LinkDB
All DBs
Position
6:complement(203244512..203254245)
Genome browser
AA seq
590 aa
AA seq
DB search
MPPPRRQERQKSASNTGAQGPPGTRSPHHLAAAPHLVSTPRSPSPSSPILPGPTILPSRS
TPPTPPRSSFHGVVTAAALMDPKSPDDRPEAAAPQPLEWRFAQVFGERGAGEDVQEVDII
SAIEFDKSGDHLATGDRGGRVVLFERTDARGNASRTELERQDYSVPRHPEFRYKTEFQSH
EPEFDYLKSLEIEEKINKIKWGQTANNALFILSTNDKTIKYWKVQDKKVKRISVMNLDTS
QSADNGTTSSSSTSSSRGLPNGGSSEKSYNCANNDLPFPPGGYASLRLPVVTGQELNPVA
RCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEINSQSFNIVDVKPANMEDLT
EVITCAEFHPTHCNTLAYSSSKGAIRLIDLRQSALCDNHSKLFEEHEAPGSKSFFTEIIA
SVSDIKFARDGRHILSRDYMTLKLWDLNMDSGPVATFQVHEHLRPKLCDLYENDSIFDKF
ECCLSGDGHRLATGSYSNLFRVFGCTPGNTEATTLEASRNPMRRQVANPTRPTRTLTSLT
RAVRRGGENAGADGNGNSNDFSTKLLHLAWHPTENSIACAAGNSLYMYYA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctccccgcagacaggaaaggcagaaaagcgcgagcaatacaggggcgcagggg
ccgcctggaactcgctctccacatcatttggctgcagcacctcacctcgtctctacccct
cgatctccgtcgccgtcttcccccattctcccaggaccgaccatcctcccctcccgatct
accccgccgacgccgccgagatcctcgttccatggtgtcgtgacggcggcggcgctcatg
gaccccaagtcccccgacgaccgcccggaggcggcggcgccacagccgctagagtggcgg
ttcgcgcaggtcttcggcgagcgcggtgctggcgaggacgtgcaggaagttgacatcatt
tctgcaatcgagtttgacaaatctggtgatcatcttgccactggtgataggggtggacgc
gtagttttgtttgaaagaactgatgccaggggtaatgccagtcggacagagcttgagaga
caagattattcggtgcccaggcatcctgagttccgctataaaactgaatttcagagtcat
gaacctgagttcgattacctaaagagtttggaaatagaggagaaaatcaacaagatcaag
tggggccaaacagccaacaatgctctctttatcttgtctacaaatgacaaaacaatcaag
tactggaaggtgcaagacaaaaaagtgaaacggatttcagtaatgaatttggatacttcc
cagagtgcagacaatgggacaacttctagttcgagtaccagtagctctagaggtcttcct
aatggaggatcctcagaaaagtcatacaattgtgcaaacaatgatctgccattccctcct
gggggatatgcatcattgcgtttgcctgtggttacaggccaagagttaaaccctgtcgct
agatgccggcgtgtatatgcacacgcccatgattaccatatcaattccatttcaaataat
agtgatggcgagacattcatatcagcagatgatctgcgaattaatctgtggaatttggaa
atcaacagtcagagctttaacattgttgatgtgaagcctgcaaacatggaggatctaact
gaggtgattacatgtgcggagttccatccaactcactgtaatacactagcctatagtagc
tcaaagggcgctatcaggcttattgacctgcggcaatcagcactgtgtgacaaccattct
aaactatttgaggagcatgaagcacctggatcaaaatccttttttacggagataattgca
tccgtttcagatataaagtttgcaagggatggacggcatattcttagtcgtgattatatg
actctcaagttatgggatctcaacatggattcaggcccagtagcaactttccaagttcat
gaacatttaaggcctaagctttgcgatctatatgaaaacgattcaatctttgacaaattt
gaatgttgtctgagtggggatggtcatcgtcttgctactggctcttacagtaatttattc
cgtgtttttggttgtactcctggaaatactgaggcaaccactttagaagcaagcagaaac
cctatgaggcgtcaggttgctaatccaacaaggcctacaagaaccctgacctctttgacc
cgtgctgtgaggagagggggtgaaaatgcaggagccgatggcaatgggaattctaatgac
ttctcaacaaagttactccatcttgcgtggcacccaactgagaattccattgcgtgtgct
gctgggaatagcttgtacatgtattatgcatag
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