Triticum urartu (red wild einkorn wheat): 125512437
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Entry
125512437 CDS
T08232
Name
(RefSeq) LOW QUALITY PROTEIN: rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
125512437
Enzymes [BR:
tua01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
125512437
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
125512437
NCBI-ProteinID:
XP_048533492
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Position
6:complement(72264167..72267411)
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AA seq
739 aa
AA seq
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MLTTARLILLAVAVSLMLQLATVSAAPSSGSRGGVTLRVDGRHVVVDNGLVQVTLSRPGG
HITGVRYGGDRTNLLHSTRSRNTGGYWDMVWNIPGSDQRGLLNSLDGSEFRVVTQSDDQV
ELSFRSTYSPGRRSRVRLNFDKRLVMLKGSSGFYSYAILEHGADTPAIDISLARLAFKLN
TERFNYMAVSDDVQRYMPRAADRESPRSSPLAYKEAVLLVDPSEPQFKGEVDDKYQYTLD
TKDNKVHGSEFKSGGPLKRDLTSHVGPTCMSVFHGTHYVGDDIVARIGDGEQWKKVMGPV
FVYLNSNSEKGDPRALWEDAKATAQAEAKKWPYSFPESPDFHKAGERGSVTGRLLVRDKY
VSRDNMPARAAYVGLAAPGQPGSWATQSKGYQFWTTASNTSGEFTIDNVRAGEYNLYAWV
PGVLGDYLNTTRVTVTPSGAINLGDLLYEAPRSGPTLWEIGVPDRSAAEMFVPDPEAKYL
NKLFQNKDRYRQYGLWERYAQLYPTDDLVYTVGESHHSKDWYFAHVTRKVGDDIVPTTRQ
VRFHLGRVVPGGTYTLRVALAAAHAARLQVQVNGATRRVGVFGTPAFGDGNAIARHGDHG
TQWSFEFPISGRLLREGDNTIHLTQTRANSIFLGVMYDYIRFEGPPVCNGPMAPQSSRLL
SYDNSQRSATKLPQMSGPHCHDTLDHPTSCTNYRQHGPESKINAVVPLRCLGLVGPPPLH
SGIGPYLFMPSFHPGPAAA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgttaacgacggcgcgcttgatcctgctcgccgtcgccgtgtcgttgatgctgcagctc
gccaccgtgtcggcggcgccatcgtcgggatcccgcggcggcgttacgctgcgcgtggat
ggtagacatgtggtggtggacaacggcctggtgcaggtgacgctgtcgaggcccgggggc
cacatcaccggcgtccgctacggcggggatcggacgaacctcctgcactccaccagaagc
agaaacactggcgggtactgggatatggtgtggaacatccccggctccgaccaacgaggc
ctgctcaactcgctggatggttcggagttcagggtggtaacgcagagcgacgaccaggtg
gagctgtcgttccggagcacgtacagcccgggacgtcggagccgcgtccggctcaacttc
gacaagaggctggtgatgctcaagggcagctccgggttctacagctacgccatcctggag
cacggcgccgacacgccggccatcgacatcagcctggcgcggctcgccttcaagctcaac
acggagagattcaactacatggccgtctcggacgacgtacagcggtacatgccgcgggcg
gccgaccgggagtcgccccgtagctccccgctggcgtacaaggaggcggtgctgctggtc
gacccgtcggagccgcagttcaagggggaggtggacgacaagtaccagtacacgctggac
accaaggacaacaaggtgcacggcagcgagttcaagagcggcgggccgctcaagcgcgac
ctcacctcgcacgtcggaccgacctgcatgagcgtgttccatggaacgcactacgtcggg
gacgacatcgtggcgcgcatcggggacggcgagcagtggaagaaggtcatgggccccgtg
ttcgtctacctcaactcaaactcggagaagggagacccgcgggcgctctgggaggacgcc
aaggcgacggcccaggctgaggcgaagaagtggccctacagcttcccggagtcgccggac
ttccacaaggccggcgagagaggctccgtcaccggccgattgctcgtaagggacaagtac
gtgagcagggataacatgcctgctcgggcagcttacgtaggcctggccgcgcccgggcag
cctggctcatgggcgacgcagagcaagggctaccagttctggacgacggcgtcgaacact
tccggggagttcaccattgacaacgtccgggcgggggagtacaacctctacgcgtgggtt
cctggggttctcggcgattacttgaacaccacccgcgtcaccgtaacacccagcggtgca
atcaacctcggcgatcttttgtacgaggctccgagatcagggccgacactgtgggagatc
ggcgttcctgaccggagcgcggcggagatgtttgtccctgaccccgaggcgaagtacctc
aacaagctcttccagaacaaagacaggtacaggcagtacgggctgtgggaaaggtacgcc
caactgtacccgacggacgatctcgtctacaccgtcggcgaaagccaccactccaaggac
tggtacttcgcacatgtcacaagaaaggtcggcgacgacatcgtgccgacgacgcggcag
gtccggttccacctgggccgcgtcgtgcccggcggcacgtacaccttgcgcgtggccctc
gcggccgctcacgcggcgaggctgcaggtccaggtgaacggggcgacgaggcgtgtgggg
gtcttcgggacgccggcgttcggcgacggcaatgcgatcgcgaggcacggcgaccacggc
acgcagtggagcttcgagttccctatcagcgggagactgctccgggaaggcgacaacacc
atccacctcacgcagacgagggccaacagcatattcctaggggtcatgtacgactacata
cggttcgaaggacctcctgtttgtaatggtcccatggccccacaatcgagccgcctactt
agctatgacaactcccaacgcagtgcaacaaaacttccgcaaatgtccggaccacattgt
catgacacgttagatcatccaacgtcgtgcaccaattatcggcagcacggtccggagtcc
aagatcaacgctgttgttccactccgctgcctaggccttgtcggacctccaccgctccac
tcgggcatcggcccctacttgtttatgccttctttccaccctggtccagctgccgcctag
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