Triticum urartu (red wild einkorn wheat): 125513277
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Entry
125513277 CDS
T08232
Name
(RefSeq) spliceosome-associated protein 130 A-like
KO
K12830
splicing factor 3B subunit 3
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125513277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tua03021
]
125513277
03041 Spliceosome [BR:
tua03041
]
125513277
03036 Chromosome and associated proteins [BR:
tua03036
]
125513277
Transcription machinery [BR:
tua03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
125513277
Spliceosome [BR:
tua03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
125513277
Complex B
125513277
Complex C
U2 SnRNP specific factors
125513277
Chromosome and associated proteins [BR:
tua03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
125513277
TFTC complex
125513277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
125513277
NCBI-ProteinID:
XP_048534305
LinkDB
All DBs
Position
6:70557233..70563183
Genome browser
AA seq
1227 aa
AA seq
DB search
MYLYSLTLQRATGAVCAVIGSFSGRDSKKSNAAGSSTQEIAVARGGTLDLLRPDPETGRL
RTLLSVDVFGAIRSLAQFRLTGATKDYLVVGSDSGRLVILEYSPDRNRFDKVHQETFGKS
GCRRIVPGQLLSVDPKGRALCIAALEKQKLVYVLNRDASARLTISSPLEAHKSHTLTFAL
TALDCGFDNPVFGAIELEYGDSDRDPTGQAASHAQKLLTFYELDLGLNHVSRKVSEPIDN
GANMLVTVPGGADGPSGLLVCCDNFVLYRNQGHPEVRAVIPRRVDLPAERGVLIVAAATH
RQKSLFFFLLQTEYGDIFKVDLDHHGDTVSELRIKYFDTIPVASAICVLRSGFLFAASEF
GNHALYQFRDIGRDVDVESSSATLMETEEGFQPVFFQPRALKNLVRIDEIESLMPIMDMR
IANLFDEETPQVYTACGRGSRSTLRILRPGLAISEMARSMLPAEPIAVWTVKKNINDMFD
AYIVVSFANVTLVLSIGETIEEVSDSQFLDTTHSLAVSLLGEDSLMQVHPNGIRHIREDG
RVNEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVEKQDMSGDVACLAI
APVPEGRQRSRFLAVGSYDNTIRILSLDPDDCLQPLSVQSVSSAPESLLFLEVQASVGGE
DGADYPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLFPCIVSHRQAMLC
LSSRPWLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVVAVAGDALRIFTIERLGETF
NETSIPLRYTPRKFVILPKKKYLAVIESDKGAFSAEQREAAKKECLEAAGAAENGNGNGD
QMENGDGQEDGEESNALPDEQYGYPKAESEKWASCIRILDPRSRDTTCLLELQDNEAAVS
ICTVNFHDKEHGTLLAVGTTKGLQFWPKRSLASGFIHIYKFVNEGKSLELLHKTQVEEVP
LSLCQFQGRLLAGVGSVLRLYDLGKRKLLRKCENKLFPRTIVSIHTYRDRIYVGDMQESF
HYCKYRRDENQLYIFADDSVPRWLTAANHIDFDTMAGADKFGNIYFARLPQDLSDEIEED
PTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECLIYGTVMGSVGAL
LAFTSREDVDFFSHLEMHLRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQYPALPADM
QRKIADELDRTPGEILKKLEDIRNKII
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgtacctctacagcctgacgctgcagcgggcgacgggcgccgtgtgcgccgtcatcggc
agcttcagcggccgcgactcgaagaagtcgaacgccgcgggctcctccacgcaggagatc
gccgtcgcccgcggcggcacgctcgacctcctccgcccggacccggagacgggccgcctc
cgcacgctcctctccgtcgacgtcttcggcgccatccgctcgctcgcccagttccgcctc
acgggggccaccaaggactacctcgtcgtcggctccgactccggccgcctcgtcatcctc
gagtactcacccgaccgcaaccgcttcgacaaggtccaccaggagaccttcggcaagtcc
ggctgccgccgcatcgtgcccggccagctcctctccgtcgaccccaagggccgggcgctc
tgcatcgccgccctcgagaagcagaagctcgtctacgtcctcaaccgcgacgcctccgcc
cgcctcaccatctcctccccgcttgaggcgcacaagtcccacacgctcaccttcgccctc
acggccctcgactgcggatttgacaaccctgtctttggtgccatcgagcttgagtacggt
gactctgaccgtgaccccacagggcaggctgctagccacgcgcagaagctcctcaccttc
tacgagctcgacctggggctcaatcatgtttcccgcaaggtctccgagccgattgacaat
ggtgctaatatgctagtgacagtgcctggtggtgctgatgggcctagcgggcttcttgtt
tgctgtgacaacttcgtcctgtaccggaaccagggacacccggaggtgcgtgctgtcatt
ccacgccgtgttgacctcccggctgagcgtggcgtcctcatagttgctgctgcgacgcac
aggcagaagagcctgttcttcttcttactacagactgagtatggtgatatctttaaggtt
gacctggaccaccatggtgatactgttagtgagctcaggatcaaatattttgacaccata
cctgtggcatctgctatctgtgtgctgcggtcaggtttcctctttgctgcttctgagttt
ggcaaccacgcactttaccaattccgtgatattggccgggatgtggatgttgagtcctcc
tctgcgacactgatggagacagaggaggggttccagccagtgttctttcagccgagggca
ctcaagaaccttgtccggattgatgagatagagagcctcatgccaatcatggatatgcgt
attgcaaatttattcgatgaggaaacaccccaggtgtacacagcttgcggccgtggctca
cgctccacgctgcggatccttagacctggccttgccatcagcgagatggcccgatcaatg
ctgcctgctgagcccattgctgtttggactgtcaagaagaatatcaacgacatgtttgac
gcctacattgttgtgtcctttgctaatgtcacacttgtgctctcaattggagagaccatt
gaagaagtcagcgacagccagttcctggacaccactcactcactggcagtttcgctcctt
ggtgaggactctctcatgcaggtccacccgaacggtatcaggcatatcagggaggatggc
cgtgtcaatgagtggaggacgcctgggaagaaaactatcaccaaggttggatcaaaccgg
ctccaggtggtaattgccctcagtggtggagagctcatctattttgagatggatatgaca
ggtcagctcatggaggtggagaagcaggacatgtctggtgatgtcgcgtgcctggccatt
gctccggttcctgaagggaggcaaaggtcccgttttctcgcagttggctcctatgataac
accatcaggatactctcccttgaccccgatgactgcttgcagcctcttagtgtacaaagt
gtgtcctcggctccggaatctctcttgttcttagaagtacaggcatcagttggtggcgag
gatggtgcagattatccagccaaccttttccttaatgctggtttgcagaatggtgtcctt
ttccgaaccaatgttgacatggtcactggccagctatcagacacacggtctcgattcctt
ggtctgagacctccaaagctgtttccctgcatagttagccaccgacaagcaatgctttgc
ctgtccagccgcccctggcttggctatatacatcaaggtcacttcctcttgacaccactc
tcatgcgacacacttgagtctgctgcgtcgttctcttctgaccagtgctcagaaggtgtt
gttgctgttgctggagacgctctgcgtattttcaccatcgaacgtctgggagagacattc
aatgagacatctatccctctgcgttacaccccgaggaaatttgtgattctaccaaaaaag
aaataccttgcagtcattgagagtgacaagggtgcatttagcgcagaacagcgagaagct
gctaagaaggagtgccttgaggctgctggtgcggcggaaaatggaaatggtaatggggat
caaatggagaatggtgatggtcaagaagatggtgaggagagtaacgcacttcctgatgaa
caatatggttacccaaaggcagaatcagaaaagtgggcttcctgcattagaattcttgat
ccgaggagcagggacacaacttgtcttctggaattgcaggacaatgaggcagctgtcagt
atttgcaccgtgaatttccatgataaggagcatggtactcttctggctgttggtactacc
aagggattgcagttctggccaaagaggagcctcgcttctggtttcatccacatatacaag
tttgtcaatgaagggaagtcgcttgaacttcttcacaaaacacaagtggaggaagtgcct
ctttctttgtgccagtttcagggacggttgcttgcaggtgttggttcagtgctcaggtta
tatgatcttgggaagagaaagttgctcagaaaatgtgaaaacaagcttttcccaaggaca
atagtgtctattcatacttaccgtgataggatctatgttggtgatatgcaagagtcgttt
cattattgcaagtacagacgggacgaaaaccagctgtatatcttcgctgatgacagtgtt
cctagatggcttacagcagcaaatcacatagatttcgacactatggcaggagccgacaag
tttgggaacatatattttgctcgtcttccccaggatctctcagatgaaattgaggaagac
ccaactggaggcaagattaaatgggagcaagggaagttaaatggtgctccaaacaaagtg
gaggagattgtgcagtttcatgttggtgatgttgtgacatgtttgcagaaggcttctttg
atacctggcggaggtgaatgccttatttatgggactgtaatgggtagtgtgggagcactg
cttgcattcacctcaagggaagatgttgacttcttctctcacttggagatgcatctccgc
caggagcatccaccattatgtggaagagatcacatggcctacagatctgcttatttccca
gtgaaggatgtaattgatggcgatctctgtgagcagtatccagccctcccagctgatatg
cagaggaagattgccgatgagctcgaccgaactccaggtgaaatcctgaagaagctggaa
gacatcagaaacaaaatcatctag
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