Triticum urartu (red wild einkorn wheat): 125514051
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Entry
125514051 CDS
T08232
Name
(RefSeq) protein CHROMATIN REMODELING 20-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
tua
Triticum urartu (red wild einkorn wheat)
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tua03000
]
125514051
03036 Chromosome and associated proteins [BR:
tua03036
]
125514051
Transcription factors [BR:
tua03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
125514051
Chromosome and associated proteins [BR:
tua03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
125514051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ADD_ATRX
QRPTase_C
YlbD_coat
Motif
Other DBs
NCBI-GeneID:
125514051
NCBI-ProteinID:
XP_048535254
LinkDB
All DBs
Position
6:complement(438261541..438274808)
Genome browser
AA seq
1500 aa
AA seq
DB search
MDVNGKLSDGDLNKTEALHSNGQPVDDVIIIESEGDENKVVVETNIIEGPFEEHKEHRCG
KTDNSVHEEASTSTDDDSDSDLYGFLRESENEQTSESDVEETDIEQVALPEEKVEELVAE
FHDVESKAAEAQESLEKESLEKIEAEVRLELSERLQGDALDLAVAIEMEQFKKEWSTELD
DLEIRSAVLLEELDAAGVELPSLYKSIESQAPNVCETEAWKNRTHWAGSQVPEQANLSIR
KADEYLQSCRPVRRKHGRLLEEGASGFLAGKVPVVDDDSVQCHEKSWSSFNELIKSIKCA
KTSFGSSNWASVYLANTPQEAAALGLQFPGVDEVEEIAEVDGAVDDIKCVDEIELSEEQR
RKYRKVREEDDAKAIKRLRRYMEKRTDGWCKVPAHGNVGLTSSSNGCCKLPLSLDDGVLD
ANRGRPLSEKQKMDKDEVSAELLKRTREDDVELDHKRSKTVVIESDDDMQMDSKLVLHIK
DSEHSSAELEKGVDIIDLDLFPSQSPKFSDMDLPKSFKCTICTKMLNASDVHRHPVLDVA
VCGSCRFLVIEKNRLEGPVSGGYCTWCVQCEQLLSCSSCKMLFCTKCLLKNLGEKCISEA
KVTGWQCCCCQPSQLEHLISECDKALSGVESSDLEGDNTSGTETNDPVSKHKRKKKIRRI
MDDTELGEETKRKIAMEKARQEHLKSMHEQSASKLRSSNIGTSSGAVLEVFLQDAGDGHI
VNPAREEDEEPVRIPSSISAKLKPHQVAGIIFMWENVIQSVRTVKSGDKGFGCILAHNMG
LGKTFQVITFLYVVMRCAQLGLRTALIVTPVNVLHNWKKEFTKWQPAELKPLRVYMLEDV
PRLKRLYLLNKWRAKGGVLLIGYSSFRNLSLGRHVKEKDTADEISNALQCGPDILVCDEA
HMIKNRKADTTHALKQVKTQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQ
NPIENGQHTNSTSDDVKIMNQRSHILYEQLKGFVQRMDMNVVKNDLPPKKVFVITVKLSQ
LQRKLYRRFLDVHGFSSGTSEKPYQHGGFFAKYQKLAQIWNHPGLLQMAKEQRGSLRRED
AVENFLTDESSSDDNHNIEIQLPNGGKQKSRTDQQSKKIDLLNEESNWWENLLDDNTFKE
ADYSGKMVLLLDILATCYELGDKALVFSQNLTTLDLVEFYLSKMQIKGKEGKYWKQGKDW
YRLDGSTPSSERQNLVERFNDPANTRVKCTLISTRAGSLGVNLHAANRVVLLDGSWNPTH
DLQAIYRVWRYGQMKPVYAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVSRTISKEE
MLHLFEFGDEELLDESGNDTIIDRTKVGMEKLSMPNSTELPVDTLMLNLLSDHPRWIAGY
HEHEVLLQENEEERLTKEEQDMAWSNFKQSQQLDAVARKAAHDHERKPIESNPPPPKVTS
RSRQAQQPKSHSNNQKKCTNLNHMLTLRSHGTKAGCTTSCDECGQTISWETLNRSDGRLR
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaatggaaaattatctgatggcgacttaaataaaacagaagctcttcactcg
aatggacagccggtagatgatgtcataattatagaatctgaaggggatgagaacaaagtt
gtagtagaaactaacatcatagaaggtccatttgaggagcacaaggaacacagatgtggc
aaaacggacaatagcgtgcatgaagaagcatccactagcactgatgatgattcagacagt
gacctgtatggatttctccgcgagtcagagaatgaacaaacttcagagtctgatgttgag
gagacagacattgagcaggtggctctgcccgaggaaaaagtcgaagaattagttgctgaa
ttccatgatgttgagagcaaagctgctgaggcgcaagaatcacttgaaaaggaatcactt
gaaaaaattgaggctgaagtaagattggagttatctgagaggctccaaggagatgcgttg
gacttagctgtggcaattgagatggagcaattcaagaaggaatggtcaaccgaacttgat
gatttggagatccgtagtgctgttctgctggaagaacttgatgctgctggcgttgaactt
cccagcctttataagtcaatagaaagtcaagcgccaaatgtttgtgagactgaagcatgg
aaaaacaggactcattgggctggttctcaagttcctgaacaagctaatctatcaatcaga
aaagctgatgagtacctgcagtcttgtagacctgtaaggagaaaacatggaaggctgctg
gaggaaggtgctagtggctttcttgcaggaaaagttcctgttgtggatgatgattctgta
cagtgccatgagaaaagttggagttcattcaatgaacttattaaatctattaagtgtgcc
aaaacttcttttggaagcagtaactgggcatcagtttatctggccaatacaccccaggaa
gctgccgccttaggtctccaatttccaggagttgatgaggtggaggagatagctgaagtt
gatggtgctgttgatgacataaaatgtgttgatgaaatagagctttctgaagaacagagg
agaaaatacagaaaggtaagagaagaagatgatgcaaaggcgataaaacgtttgcggcgt
tatatggaaaaaaggacagacggctggtgcaaggtacctgctcatggcaacgtcggtttg
acctcgtcatcaaatggatgctgtaagctacctctgtcattagatgatggtgttttggac
gccaacaggggtcgtcctttatctgagaaacagaaaatggataaagatgaagtttccgct
gagttgctgaagcgaacacgtgaagatgatgttgagcttgaccacaagaggtcaaaaact
gtagtgatagagagtgacgatgacatgcagatggacagcaagctagttctgcatatcaag
gacagcgagcatagttcagcagagcttgaaaagggggttgacattattgatcttgatctt
ttcccatcacaaagccctaagtttagtgatatggatttacccaagtcttttaagtgcaca
atttgcaccaaaatgttgaatgcctctgatgtgcatcgtcacccagtactggatgttgct
gtttgtgggtcttgcagatttctggtgatagagaagaaccgtcttgagggccctgtatct
ggtggttattgcacctggtgtgttcagtgtgaacaacttctaagttgcagttcctgtaag
atgcttttttgtacaaaatgcttgttaaagaatcttggtgagaaatgcatatcagaagct
aaagtcactggctggcagtgttgctgctgccaacccagtcaactggaacacttaatttct
gaatgtgacaaggctctgagtggtgttgaatcttctgatctcgagggtgacaacacttct
ggaaccgaaaccaatgaccctgttagcaagcacaaaaggaaaaagaagataagaagaatc
atggatgatacagaacttggggaggaaacaaagcgtaaaattgcaatggagaaggctagg
caagaacatttgaagtcaatgcatgagcagtctgccagcaagttaaggagcagcaacatt
ggaacttcctctggggctgtattggaagtcttcctacaggatgctggggatggccatatt
gtcaaccctgccagggaggaagacgaggaacctgttagaattccaagcagcatatctgct
aaactgaagcctcatcaggtagcaggaataatatttatgtgggaaaatgttatccagtct
gttagaacagtcaaatctggtgacaaaggttttgggtgcattttggcgcataacatgggg
cttgggaaaacttttcaggttattaccttcctgtacgttgttatgagatgtgcccagttg
ggactccgcacggcacttatagttacccctgttaatgttctgcataattggaagaaagag
ttcaccaagtggcaaccggccgaactaaagccccttcgtgtgtacatgctggaagatgtt
ccgaggctaaaaaggctgtatttacttaacaagtggcgagcaaaaggtggagtacttctc
attggttattcatcatttaggaacttatctcttggaagacatgtgaaggaaaaagatact
gcagatgagatttctaatgcgttgcagtgtgggccagatattcttgtatgtgatgaagca
catatgataaagaataggaaggccgacactacacacgctctaaaacaagtaaagacgcaa
agaagaattgcgttaactggatccccattacagaataatttgatggaatattactgtatg
gttgattttgtcagggaaggttttcttggaagcagccatgaattccgcaataggttccag
aacccgatcgaaaatgggcagcacacaaattctacatcagatgatgtcaagatcatgaac
caacggtcacacattctgtatgaacagctgaaaggctttgtccagcgaatggacatgaat
gtggtgaagaatgatctaccgccgaagaaggtttttgtcattaccgtaaagctctctcaa
ctgcaaagaaaactataccgaagattcttggatgtgcatggtttctcaagcggcacttct
gaaaaaccttatcagcacggtggcttctttgccaaatatcaaaaactagcccagatatgg
aaccacccgggccttctccagatggctaaagagcagagaggaagtctgcgccgagaagat
gctgttgagaactttctgacggatgagagttctagtgacgataatcataatattgaaatt
caactgccaaatggagggaaacagaagagtaggactgatcagcagtccaagaaaattgac
ttactgaacgaggaaagtaactggtgggagaaccttctggatgataatacttttaaggaa
gcagattacagtggcaaaatggtcttgctccttgatatactggcgacttgttatgaattg
ggtgacaaggcactagtgttcagccagaatttgaccactttggatttggtggagttttat
ctatctaagatgcaaatcaaaggaaaagaaggcaaatattggaagcagggcaaggactgg
tacaggcttgatgggagcactccatcatccgagcggcagaaccttgtcgaaagatttaat
gaccctgcaaacacaagagtaaaatgcacattgatatctactcgagctggatctctgggt
gtcaaccttcatgcagcaaaccgtgtggtccttctggatggttcatggaatccaacacat
gatttgcaggccatttatcgggtttggaggtatggccagatgaaacctgtgtatgcttac
cgcctaatggcacatggaacaatggaagagaaaatatataagcggcaggtgacaaaagaa
gggctcgcagcaagagtggtggatagacaacaagtatctagaacaatttccaaagaagag
atgttgcatctctttgaatttggtgatgaggaattgttggacgagagtgggaatgatacc
ataattgatcgcacgaaggttggaatggagaagctatccatgcccaatagcactgaacta
ccggtggacacgctcatgctgaacctacttagtgatcaccctcggtggattgcaggttac
catgaacacgaagttcttctgcaagaaaacgaagaggaaagactcaccaaggaagagcaa
gatatggcatggtcaaattttaaacaatcgcagcagttggatgccgtggcaaggaaagct
gcacatgatcacgagagaaaaccaatagagagcaaccctcccccgcctaaagttacttca
agaagtcggcaggcgcagcaaccaaaatctcattcgaacaaccagaagaaatgcaccaac
ttgaaccacatgctgactctcagaagccacggtaccaaagctggatgcacgacaagctgt
gacgaatgtggccagaccattagttgggagacactaaacagatcagatggtagattgagg
tga
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