KEGG   Triticum urartu (red wild einkorn wheat): 125514145
Entry
125514145         CDS       T08232                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
tua  Triticum urartu (red wild einkorn wheat)
Pathway
tua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125514145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tua03041]
    125514145
   03036 Chromosome and associated proteins [BR:tua03036]
    125514145
Spliceosome [BR:tua03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    125514145
 Complex B
    125514145
 Complex C
   U2 SnRNP specific factors
    125514145
Chromosome and associated proteins [BR:tua03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    125514145
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_ECM29 HEAT_2 HEAT_EF3_N Htt_N-HEAT_1 Cnd1 XMAP215_CLASP_TOG Adaptin_N Vac14_Fab1_bd UME IFRD
Other DBs
NCBI-GeneID: 125514145
NCBI-ProteinID: XP_048535374
UniProt: A0A8R7UUK5
LinkDB
Position
6:82998069..83003792
AA seq 1282 aa
MDGIDAELARAQDERRKLEEALAAGAPMAVSSVTFDKDLYGGGGSGSDRFAGYDTSIPAS
EDDAPEDDSAEPSAANPAVRRLASYTGHAVAAADIPRSEDDDGMPAKRSQRIIDREDDYR
RRRLDRIISPERHDAFASGEATPDPSVRTYADAMRESKVQQEKEHVLREIAKKKKEEEEK
AKEKKAAPQPQPAATKRRNRWDQSQDGDAAAGAKKSKTSDWDAPDATPGIGRWDATPGRV
GDATPSVRRNRWDETPTPGRMADADATPAAGGITPGATPSGAWDATPKLPGGLVTPTPKK
QRSRWDETPASMGSATPGGTAATPAGFNTPGQTPFGAENLATPTPGHLAARGPMTPEQYQ
LLRWERDIEERNRPLTDEELDSMFPQEGYKILEPPASYQPIRTPARKLLATPTPLGTPMY
AIPEENRGQHFDVPKDLGPGLPLMKPEDYQYFGTLLNEDEEEQLTPEEQKERKIMKLLLK
VKNGTPPQRKTALRQLTDKAREFGAGPLFNKILPLLMQPTLEDQERHLLVKVIDRVLYKL
DELVRPFVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEY
VRNTTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILMGCAVLPHL
KNLVEIIEHGLSDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVL
AAFLKAIGFIIPLMDALYASYYTKEVMQVLIREFQSPDEEMKKIVLKVVKQCVSTEGVEA
DYIRSDILPDFFKHFWVRRMALDRRNYKQLVETTVEMANKVGVTGIVGKIVEDLKDESEP
YRRMVMETIEKVVANLGASDIDPRLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALG
QRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAIVMKQCQEEQLMGHLGVVLYEYL
GEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRI
ADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLK
VQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMG
KDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYIWPNIFET
SPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVA
SYPALGDDGDNIFSRPELAMFV
NT seq 3849 nt   +upstreamnt  +downstreamnt
atggacgggatcgacgcggagctcgcgcgcgcgcaggacgagcgccggaagctggaggag
gccctggcggccggcgcgcccatggccgtctcctccgtcaccttcgacaaggacctctac
ggcgggggcggctccggctccgaccgcttcgccggctacgacacctccatcccggcctcc
gaggacgacgcgcccgaggacgacagcgccgagccctccgccgccaaccccgcggtgcgc
cgcctcgcgtcctacacgggccacgccgtcgccgccgccgacatcccccgctcggaggac
gacgacgggatgcccgccaagaggtcccagcgcatcatcgaccgcgaggacgactaccgc
cgccgccgcctcgaccgcatcatctcgcccgagcgccacgacgccttcgcgtccggggag
gccaccccggacccctccgtccgaacctacgccgatgccatgcgcgagagcaaggtgcag
caggagaaggagcacgtgctgcgggaaatcgccaagaagaagaaggaggaggaggagaag
gccaaggagaagaaggctgcgcctcagccacagccagccgcgaccaaacggcgcaatagg
tgggatcagtcgcaggacggcgatgctgctgctggggccaagaagtccaagacctcagac
tgggatgcccctgatgcaactcctgggattgggcgctgggacgccactcctggccgtgtt
ggagatgcaacgccctctgtgaggaggaataggtgggatgagactccaactccagggagg
atggctgacgcagatgcaactcctgcagccggtggcattactccaggagccaccccttct
ggggcatgggatgctactcctaagctgcctggtgggcttgtcacaccaacacccaagaag
cagagatctaggtgggatgagacaccagcaagtatggggagtgcaacacctggtggtaca
gcagcgacacctgctgggttcaacactcctgggcaaacaccattcggagcagagaacctt
gccacgccaacacctggtcaccttgctgctcgtggcccgatgactccggagcagtaccag
ctcttgcggtgggagcgggacattgaggagcggaacaggcctctcactgatgaggagctt
gactccatgttcccgcaggagggatacaagattcttgagcctccagcttcataccagccc
atacgtaccccagcaaggaagctgcttgctacgccaacacctctgggcacaccaatgtat
gctattccagaggagaaccgtggacagcattttgatgtgcccaaggacttgggtcctggt
ttgcccctcatgaagccagaggactaccagtactttgggacgttgctgaatgaggacgag
gaggagcagctaacgccagaggagcagaaggagagaaaaatcatgaagctcctgctcaag
gtaaagaacggcacacccccacagcggaagacagcactccggcagctcacggacaaagca
cgcgagtttggtgctggcccattgttcaacaaaatcctgccattgctcatgcagccaaca
cttgaggaccaggagcggcatctcctggtgaaggtcattgatagggtgctgtataagctg
gatgagctggtccgtccatttgtgcacaagattcttgttgttatcgagccacttttgatt
gatgaggattactatgctcgtgttgagggcagggagattatctcaaatcttagcaaagct
gccggtcttgctactatgattgctgccatgagaccggatattgataacattgacgagtat
gtgaggaatacgactgctagggcattcagtgtggtggcttctgctttgggtatcccggcc
ctcctcccatttttgaaggctgtttgtcagagtaagaagtcctggcaagctcggcacact
ggtatcaagattgttcagcagattgctattctcatgggctgcgctgttctgcctcacctt
aagaacctagttgagatcattgagcatggtctaagcgacgagaaccagaaagtgcggaca
atcactgccctatctcttgctgcacttgctgaagctgccgcaccctacggtattgaaagt
tttgatagtgtgttgaaacctctctggaagggtatcagatctcaccgtggaaaggtcctt
gctgccttcttgaaggctattggtttcatcatccctcttatggatgctctgtatgccagt
tactacacgaaggaggtgatgcaagtcctgattagagagttccagtcaccagatgaagag
atgaagaagattgtcctgaaggttgttaagcagtgtgtcagtacagagggtgtggaggct
gattatatccggagtgacatccttccagacttcttcaaacacttctgggttaggagaatg
gccctagatcgtaggaactataagcaacttgtggaaacaacagtagagatggcaaacaag
gtgggagttactggtatcgttgggaagattgttgaggatctgaaagatgaaagtgagcct
tataggagaatggtgatggaaacaattgagaaggtggtggccaacttgggtgcctcggat
attgatcctcgtctggaggagctgcttattgatggcatcctgtatgctttccaagagcag
acaagtgatgatgcaaatgtcatgcttaatggttttggagctgttgtgaatgcgctcggc
cagagggtcaagccttaccttcctcagatatgtggtaccattaagtggcggttgaacaac
aagagtgcgaaagttaggcagcaagctgctgatctgatctcaaggatagctattgttatg
aagcagtgccaggaggagcagcttatgggtcacctgggtgttgtgctatatgagtacctg
ggagaggagtatcctgaggtgctgggttcaattctcggagcattgaaggctatcgtgaat
gttattggtatgactaagatgacgcctccgatcaaggatctccttcctcgtctgactccc
atcttgaagaataggcatgagaaggtccaagagaactgcattgatctagttggtaggatt
gctgatcgtggagcagaatttgttccagctagggagtggatgaggatttgttttgagttg
ttagaaatgttgaaggctcacaagaagggtatcagaagagccactgtgaacacatttggt
tatattgccaaggcaattgggccacaggatgtgttggccactctgttgaataacttgaag
gtgcaggagcgacagaaccgtgtctgcaccactgtagcaattgctattgttgctgaaact
tgctcgcctttcacagttttgcccgccctcatgaatgagtaccgagttccggagctaaat
gttcagaatggtgtattgaagtctctctctttcctctttgagtatattggcgagatgggc
aaagattacatatatgctgtcactcccttgctcgaagatgccctaatggacagggatctg
gttcacaggcagactgctgcatctgctgttaagcatatggctctgggagttgctggcttg
ggttgtgaggatgctcttgtccatttgcttaactatatctggcccaacatattcgagaca
tctccccatgttataaatgccgtcatggaggctattgaggggatgcgagttgctctaggt
gcagctgtggttctgaattattgcctccaaggccttttccatccagcaaggaaagtacgt
gaagtatattggaagatctataactcgctgtatattggtgcacaagatgcacttgttgcc
tcttatcctgcactaggcgatgatggagacaatatcttcagccgtccagagctagccatg
tttgtgtga

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