Triticum urartu (red wild einkorn wheat): 125514675
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Entry
125514675 CDS
T08232
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 27-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tua03041
]
125514675
03009 Ribosome biogenesis [BR:
tua03009
]
125514675
Enzymes [BR:
tua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125514675
Spliceosome [BR:
tua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
125514675
Ribosome biogenesis [BR:
tua03009
]
Eukaryotic type
90S particles
Helicases
125514675
Pre-60S particles
125514675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SNF2-rel_dom
AAA_22
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
125514675
NCBI-ProteinID:
XP_048535973
LinkDB
All DBs
Position
6:511267301..511272499
Genome browser
AA seq
553 aa
AA seq
DB search
MVKSLLRPSMEEEEEKEENVMEGMRKRKREEKGMDGMEEGGKKEQKGKGGGILTNELFSE
LFVSELTAKAIREMNYTHLTQIQARSIPHLMVGDDVLGSARTGSGKTLAFLIPVIELLHN
ARFTPRNGTVVIVVCPTRELAIQTHDVAKKLMKYHSQTLGYVIGGTNMRSEANQLVKGVN
LLVATPGRLLDHLKSTGGFNYKGLKCLIIDEADRILEQNFEEDMKQIFKLLPQNKQTVLF
SATQTQRVEDFANFTFGKKEERQRKLVYVGVDDSELKPTVDGLQQGYCVIPSEKRFLVLY
TFLRKMQVMKQKVKVMVFFSSCSSVKFHAEFLNFIGIECHEIHGQLKQQKRTTTFFQFSK
EESGILLCTNVAARGLDIPNVDYIVQYDPPDDPKDYIHRVGRTARGDKGQGRAFLFLLPE
ELKLLIYLHASNISLTEYEFSEKHVPKSQSKLEKIVAGNYFLNQSAKKAYRSYLLAYNSH
SMKDIFDVHQLDLKKVAASFCFNSPPKVNLNLESSASRHRKMRKVDGRKRHGLSPSNPYG
RRGGCDHMDVARF
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaatccttgctccgcccctccatggaggaagaggaagaaaaggaggagaatgtg
atggaggggatgcggaagcggaagcgggaggagaaggggatggatgggatggaggagggg
ggaaagaaagagcagaagggcaagggaggtgggattctcacaaacgagcttttctcggag
ctcttcgtatccgagctcactgccaaggccatcagagagatgaactacacccacctcacc
cagattcaagctagatccatacctcatttgatggtaggagatgatgtgctgggttcagcc
aggactggctcagggaagacactcgctttccttatacccgtgatcgaactgctacacaat
gcgcgcttcacgccgaggaacggaactgtagttattgtggtctgcccaacaagggagctt
gctatccagacacacgatgttgccaagaaattaatgaagtatcactctcaaactcttgga
tatgtaattggtggcactaacatgagaagtgaggcaaaccagcttgtgaaaggggtcaat
ctattagttgcaacgccaggcaggcttctggaccatctgaaaagtaccggtggtttcaac
tacaaagggctaaagtgccttataattgatgaagctgatcgcatacttgagcaaaatttt
gaggaggacatgaaacaaatatttaagctcctccctcagaataagcaaactgttctcttt
tctgccacacagactcaaagggttgaagattttgcaaattttacgtttgggaaaaaggaa
gaaagacaacgaaagcttgtttatgttggagtagatgactctgaattaaagcctaccgtt
gacggcttgcagcagggctactgtgtcattcctagcgagaaaaggtttctggttctgtat
actttcctaagaaagatgcaggttatgaagcagaaggtgaaggtcatggtgttcttttca
tcgtgtagctcagtcaaattccatgcagaatttctaaatttcattgggatagagtgtcac
gagatccacgggcaactgaagcagcagaaacgcactactacattcttccaattttcgaaa
gaggaaagcggtatcttattgtgcacaaacgtggcagcacgtgggcttgatattcctaat
gtggactacattgtgcaatatgatcctccagatgacccaaaggactacattcacagagtc
ggtcgtactgcccgaggtgataaaggccaaggacgcgcatttttgttcttactaccagaa
gaactgaagttgcttatttacctgcacgcgtccaatatttctctgactgaatacgagttc
agtgaaaagcatgttccaaaatcgcaatccaaacttgagaaaattgttgctgggaattac
ttcctaaaccagtcagcgaagaaagcctacaggtcctaccttttggcatacaactcacac
tctatgaaggacatctttgatgtccatcaacttgatctcaagaaagttgcggcatctttc
tgttttaatagccctcctaaagtgaatctgaacctggagagtagtgcatcgagacaccga
aagatgaggaaagtggacggcagaaagaggcatggacttagcccttcaaacccctatgga
aggagaggcggttgtgatcacatggatgttgcaagattctag
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