Triticum urartu (red wild einkorn wheat): 125514793
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Entry
125514793 CDS
T08232
Name
(RefSeq) putative transcription elongation factor SPT5 homolog 1
KO
K15172
transcription elongation factor SPT5
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125514793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tua03021
]
125514793
03019 Messenger RNA biogenesis [BR:
tua03019
]
125514793
Transcription machinery [BR:
tua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
125514793
RNA polymerase I system
125514793
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
125514793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
Spt5_N
Ribosomal_L19
GFRP
Motif
Other DBs
NCBI-GeneID:
125514793
NCBI-ProteinID:
XP_048536102
LinkDB
All DBs
Position
6:complement(519970919..519977810)
Genome browser
AA seq
1032 aa
AA seq
DB search
MSRRGREEEEEEEFEQVEEEEEADESEVEERGGKRSRGGGGKGSGVASFIDDAASEDDDE
EEEDDDDDYEEGGGGRARGRRPSKRKRSILIDDMAQVDDDDGEEEEEDGYEEGFIDDDAR
ADNPDEDVQRGSRRHFNPNPMDDTDDMENLEEMLKWKYRTQSHSDFDEEGLTEVEQQALL
PSVKDPKLWMVKCAIGHERETALCLMQKFIDRQDLQIKSVVALEHLKNYIYVEAEKEAHV
KEACKGLRNIFSSAKILLVPTKEMTDVLSVTSKSADLSRDTWVRLKLGIYKGDLAKVVEV
DDVRQKVTVKLIPRLDLQALTDKLKGLKVAKKKSFIPPPRLFSTDEAREMNIPVERRRDK
DSGEYFEMVGALKFEDGFLRKKVSIKSISTQNVKPSLDELEKFGRVGDDVNEDVARLSTL
SRKKGHFMKGDAVVVVKGDLKDIRGCVEKVEDSIVHIRPTRSDLPKTLAFSEKDLCKYFN
PGDHVKVAFGVQEGVTGMVVKVEGHVLTILSDTSKEHIRVFADHVVESSEVTTGLTRIGD
YESHDLVLLDNLSFGVIVRVESEAFQVLKGVPDKPEVVLVKLREIKYKIDRRTSAKDSKN
NTVSTKDIVRVIEGPCKGKQGPVEHIHKGICFIHDRHHLEHSGFICAKAQSCVLVGGSVV
NSSRMGVDTADPRLGAFRSPARILQSPGGLPPRGPYMNSGGRFGGGGRGGRGHDALVSRC
IKIKSGPYKGYRGRVKEVNGALVRVELDSLMKIVTVKREDIADTANVGTPFRESRYSLGS
ETPMHPSRTPLYPIQTPMREPGATPICDGSQTPMHNQAWAPMSPPRDNQEDGNRGTWGSW
GISPAYQPGTPVTRPFDAPTPGSGWESTSGTGFGDAPFNAPTPSAQPMTPIPASYLPGTP
GGQLMTPGNAGMDAMSPMIGDEGGSNWLLPDVCVNVSRGDGSTNGVVKEVLLDGSCRVAL
GPSGSGDEVTALPDELEIIRPKKSDRVKIMNGSMRGVIGRLVGVDGSDGIVRVESPLDMK
IVDLVILGKLAT
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccgcggccgcgaggaggaggaggaggaggagttcgagcaggtagaggaggag
gaggaggccgacgagtcggaggtggaggagaggggcggcaagcggtcgcgcggcggcggg
gggaagggctcgggcgtcgcgagcttcatcgacgacgcggccagcgaggacgacgacgag
gaggaagaggatgacgacgacgactacgaggagggcggcggcggtcgcgcccgcggccgc
cggcccagcaagaggaagcggtcgatcctgatcgacgacatggcgcaggtcgacgacgac
gacggcgaggaggaggaggaggacggctacgaggaaggttttattgatgatgatgctcgg
gctgataatcctgacgaggatgtgcaaaggggttctagacgtcatttcaatccaaatcca
atggatgatacagacgacatggagaacttggaagagatgttaaaatggaaatatagaacg
caatcacactctgattttgatgaagagggtctaaccgaggttgaacagcaagctctcctg
ccatcagtgaaggatccaaagctctggatggtgaaatgtgcgattggacatgagcgagag
acagccctttgtctaatgcaaaagttcattgataggcaagatctccagattaagtccgtc
gttgcattggaacacctaaagaattacatttatgttgaagcagagaaagaagcccatgtc
aaggaggcttgcaaaggtctgcggaacatcttttcttcagcaaaaatacttctggttcct
acaaaagaaatgactgatgttctctctgtcacgagtaagtctgctgatctttcaagagat
acatgggtcaggttgaagcttggtatatataaaggggatcttgctaaggttgtcgaagtt
gatgatgtgcgccaaaaggttactgtgaagctcattcctagattagatttacaagctttg
acagataaattgaaaggtcttaaggttgcaaagaagaagtcgtttattccaccaccaagg
ttatttagtaccgacgaggcgagggagatgaacattcctgtagaacggaggagagataaa
gattctggggaatactttgagatggttggcgctttaaaatttgaagatggtttcttgcgc
aaaaaagtctcgataaaatcaatcagcacacagaatgttaagccatcacttgatgaattg
gagaaattcgggagagttggtgatgacgtgaatgaagatgtggctagattgtccacactc
agcaggaagaagggacattttatgaaaggcgatgctgtagttgttgttaaaggtgatctc
aaggacataaggggctgtgtggagaaagtagaggattctattgttcacatccgaccaaca
cgatctgatcttccgaaaacacttgccttcagtgagaaagatctctgcaaatatttcaat
cccggggaccatgtaaaagtggcttttggtgttcaagaaggtgtgacaggcatggtagtt
aaagtggaaggacatgtcttgaccattttatctgacacaagcaaagaacatatccgtgtg
tttgcagatcatgttgtggagagttctgaggtcacgacggggcttaccagaattggtgat
tatgaatcgcatgatcttgtccttcttgacaatttatcatttggtgtgattgtaagggtg
gaaagcgaagcatttcaggttctcaaaggagtgcctgataaacctgaagtggtgcttgtg
aaactgagagaaataaaatacaaaatcgatcggcgcacatctgcaaaagatagcaagaat
aacacggtgtcaactaaggatattgtcagggtcattgaggggccatgcaagggaaagcaa
ggacctgtggaacatatacacaaagggatatgttttatacatgaccgccaccaccttgaa
cattcaggctttatctgtgcaaaagcacaatcgtgtgtccttgttgggggatcggttgtc
aacagcagcaggatgggtgttgatacagcagatccacggcttggtgcttttagatctcca
gcaaggatcttgcaatctcctggagggcttccgccgagaggaccttacatgaattctggt
ggaaggtttggaggaggtggtcgtggtggcagagggcatgatgccttggtgagtagatgc
atcaaaattaaatctggtccctacaaaggatatcgtggccgtgttaaagaagtgaatggt
gcacttgtgcgtgtggagcttgattcacttatgaagattgtcacagttaagagagaggat
attgctgacacagcgaatgttgggacaccattccgtgaatctcgttattcattgggcagt
gaaacacctatgcacccatctcgaacgccattgtatcctattcaaactccaatgcgagaa
cctggagcgacaccaatttgtgatggatcgcaaactcctatgcataatcaagcctgggca
ccaatgagtccaccgagggataaccaggaagatggaaatcgtggcacttggggctcttgg
gggatcagtccagcttaccagccaggaactccagtaactaggccatttgatgcccccact
cctggatcagggtgggaaagtacctctggaactggctttggtgatgctccattcaacgct
ccaacacctagtgctcaaccaatgaccccaattcctgcctcttatttgcctggaacccct
ggtggccagctaatgaccccagggaatgctggaatggacgcaatgtctccaatgataggg
gatgagggcggcagtaattggctcttgccagatgtttgcgtcaatgtgtccagaggagat
ggttccaccaatggtgtggtgaaggaagtgctcctggatggatcttgccgtgtcgcactt
gggccatcaggcagtggggatgaagtaacagctcttccagacgagctcgagatcatcagg
ccgaagaagagcgacagggtcaagataatgaatggcagcatgcgtggagttataggaaga
ctggtaggagtcgacgggtctgatgggattgtccgggtggaaagtccgcttgacatgaaa
atagtagacctggtgattttgggcaaactagcaacgtga
DBGET
integrated database retrieval system
