Triticum urartu (red wild einkorn wheat): 125514896
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Entry
125514896 CDS
T08232
Name
(RefSeq) probable rhamnogalacturonate lyase C
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
125514896
Enzymes [BR:
tua01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
125514896
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
125514896
NCBI-ProteinID:
XP_048536226
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Position
6:complement(30593494..30597847)
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AA seq
708 aa
AA seq
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MSTWAVMAFLLSVIAAASQLPPVARAATPGTLGAGVTLQEDQHQVVVDNGIVQVAVSKPQ
GQIIAVRYVDDTNLLYLNNDEISGGYWDVVWNFPGSGYPRGMNDMLDGTEFRVVSATEEQ
VELSFMRTYDPSRLNSIPLTVDKRLVMLRGGSGFYCYAIFEHAGGWPAVDVSEARLVFKL
DPTTFNYMAISDGIQRYMPGAADRDAPRAVPLAYKEAVLLVHPSEPQFAGEVDDKYQYSM
DNKDNRVQGWIAGARGGGGVPVPVGFWVVTPSNEFKSGGPLKRELTSHIGPTSLTMFMGT
HYIGKDMVAKIEAGEHWKKVMGPVFIYLNSNPQRGALWEDAKAQAEVEASRWPYSFPESP
DFHKAGERGSVTGRLMVRDRYTSGGEDVPARLAYVGLAAPGQPGSWATESKGYQFWTRAS
ATGGSFAIGNVRAGEYNLYAWVPGVLGDYMRTDPVTVVPGVAIALGELVFEPPRSGPTLW
EIGVPDRSAAEFLVPDPNPRYLSKLFVARDKYRQYGLWERYAELYPAGDPVFTIGVSNPF
KDWFFAHVTRKTGNGENVPTTRRIRFNLPRVAGGGTYTLRIALAAAHMSKLKVQVNGATG
KGPAGGVFLTPEFGDDNAIARHGEHGRWWSFEFPIDGRLLVQGENTISVTQPRASSVFVG
VMYDYVRLEGPSGWDSGVTSSAGLGKILPLGLLCGLVVLPTLIFLLSK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtgggcggtcatggcgttcctgctctctgtcattgcggcggcgtcgcagctg
ccgcccgtggcgcgcgcggcgactccagggaccctaggcgccggcgttacgctgcaggaa
gatcagcaccaggtggtggtggacaacggcattgtgcaggtggcagtgtccaagccgcag
ggccagatcatcgccgtccgttatgtcgacgacactaacctcctctacctcaacaacgat
gagatatcaggcgggtactgggatgtagtttggaactttccaggatcgggatatcccagg
ggcatgaacgacatgttggatggtaccgagttcagggtggtatctgccaccgaggagcaa
gtggagctctctttcatgagaacctacgacccatcacgcctcaacagcatcccgctcacc
gtcgacaagaggctggtgatgctgagaggcggctccgggttctactgctacgccatcttc
gagcacgccggcggctggccggccgtcgacgtctccgaggcccggctcgtcttcaagctc
gaccccacgacgttcaactacatggccatctcggacgggatccagaggtacatgccaggg
gcggcggaccgggacgcgccccgggccgtgccgctggcgtacaaggaggccgtgctgctc
gtgcacccgtcggagccgcagttcgcgggggaagtggacgacaagtaccagtactcgatg
gacaacaaggacaaccgcgtccagggctggattgccggtgcccgtggcggcggcggcgtc
ccggtgccggtggggttctgggtcgtcacccccagcaacgagttcaagagcggcggcccc
ctcaagcgcgagctcacctcccacatcggccccacctccttgaccatgttcatggggact
cattacatcgggaaggatatggtggcgaagatcgaggccggcgagcactggaagaaggtc
atggggccggtgttcatctacctcaactccaacccacagcggggagcgctgtgggaagac
gccaaggcgcaggcggaggtcgaggcgagcagatggccgtacagcttcccggagtcgccg
gacttccacaaggcaggcgaaaggggctcggtcaccggtcggttgatggtcagagacagg
tacacgagcggcggcgaggacgtgcccgcccggctggcatacgtcggcctcgccgctcct
ggtcagcccggctcctgggcgacggagagcaagggttaccagttctggacgagggcgtcg
gcgaccggcggcagcttcgccatcggcaacgtccgggcaggagagtacaacctctacgcc
tgggtccccggggtcctcggcgactacatgcgcacggacccagtaacggtggtgcccggc
gtcgccattgccctcggcgagctcgtgttcgagccgccccgatcagggccgacgctgtgg
gagatcggcgtgccagaccggagcgccgccgagttcttggtccctgatcccaaccccagg
tacctcagcaagctcttcgtcgccagggacaagtacaggcagtacgggctgtgggagcgg
tacgccgagctgtaccccgccggcgaccccgtcttcaccatcggcgtgagcaaccccttc
aaggactggttcttcgcgcatgtcacaaggaagacgggcaacggcgagaacgtgccgacg
acgcggcggatccggttcaacctgccccgcgtcgccggcggcggcacctacacgctgcgc
atcgcgctcgcggcggcgcacatgtccaagctgaaggtgcaggtgaacggggcgacgggg
aaggggccggccgggggagtgttcttgacgcccgagttcggggacgacaacgcgatcgcg
cggcacggcgagcacggcaggtggtggagcttcgagttcccgatcgacgggcggctgctg
gtgcaaggggagaacaccatcagcgtcacgcagccgagggcgtccagcgtgttcgtgggg
gtcatgtacgattacgtccggctggaagggccgtccggttgggattctggcgtcacaagt
agtgctggcctaggcaaaatcttgcctctcggtttgctatgtgggcttgtcgtgctacca
acattgatatttctgctaagcaagtga
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