KEGG   Triticum urartu (red wild einkorn wheat): 125516603
Entry
125516603         CDS       T08232                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 1-like
  KO
K16251  DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
Organism
tua  Triticum urartu (red wild einkorn wheat)
Pathway
tua03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    125516603
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tua03021]
    125516603
Enzymes [BR:tua01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     125516603
Transcription machinery [BR:tua03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     125516603
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_3 RNA_pol_Rpb1_5 RNA_pol_Rpb1_1
Other DBs
NCBI-GeneID: 125516603
NCBI-ProteinID: XP_048537940
LinkDB
Position
6:complement(94309419..94325556)
AA seq 1948 aa
MGVLGFWGRVLVRSCRSRLSAFVWSVVFAASFGLLLAGKKSGLFASFLAMEEEDQSAVLV
AEGAIKSIKLSLSTEEEICAYSINDCPVTHPSQLGNPFLGLPLETGKCESCGATENGKCE
GHFGFIELPVPVYHPCHVSELRQLLSMVCLKCLRIKKGKVKQKNGKENVSVTACHYCRGL
PALYLKEIKTEDGAFRLELRAPPKKHMTERSWDFLDKYGGFHHGGASHCRTLLPVEVIIS
PCSVFKMLFVLTGDPYIGADVVGLPSEVAKRITFEEQVIVLKGPQDAKRFAVSTDSSHLS
TKQWLEKMRTLFISKGSGFSSRSVLTGDPYIGADVVGLPSEVAKRITFEEQVTDININRL
QEVVDKGLCLTYRDGQTTYAITVGSKGYTTLKVGQTISRRIVDGDVVFLNRPPSTHKHSL
QAFTVYIHDDHTVKINPLICSPLAADFDGDCVHIYYPQSLAAKAEALELFSVEKQLTNSH
NGKVNLQLANDSLLALKHMSSRTMLSKESANQLAMLLSLSLPPPAVVKSKPCWTIAQIMQ
SALPAELTCEGDRFLVRDSTVIRLDIDKESVQASFSDLVSSILAVKGPGDALKFLNALQP
LLMEFLLLDGFSVSLQDFSVPKPLLEEAQECIKKQSLVLEQSRCSSSQSVETRVDNNLKD
VKQQIADFVVKSSRLGLLIDPKSDSSVSKVVQQLAFVGPQLYREGKFYSRCLVDDCFSSF
VNRHPPIEDGVQHPPEAYGLVRSAYFHGLNPYEELVHSICTRETIVRSSRGLTEPGTLFK
SLMAILRDVVICYDGTVRNICSNSIMQLKYKEEDDTDFPSAIAPGEPVGVLAATAISNPA
YKAVLDSSQSNNTSWELMKEILKTKVSYKNDAKDRKVILFLNDCSCPKKFCKEKAAIAVQ
GCLKRVTLEDCATDICIEYKKQVSLDAISEATPAFVGHIHLEKAHLEKINVSTDEILQKC
QEVSGKHANKKGTLGHLFKKITFSTCECSFAQKPGDGKVPCLQFSFSEDIPMLSDSVEKA
VNVLADSLCGVLLEIIIKGDPRVQEAKLTWVGSDATSWVKHTKKISKGEPAVEIIVEKKE
AMQNGDAWRIAMDACIPVMNLIDTQRSIPYGIQQVRELLGISCSFDQVVQRLSKTMKTVA
KGILKDHLVLVANSMTCTGNLNGFHNGGYRATFRSLKVQVPFTEATLLTPMKCFEKAAEK
CHSDSLGSVVSSCSWGKHAALGTGSSFQILWNENQLKSNKEYGDGLYDFLALVRTDQEKA
AYTFLDDVDYLVEDNAMDDICLSPEMDGIHGMPTFEDDPEQQNTEKDSSWENGTTAGASW
EQNANAGNDSGNWGGGSTVENDSTDWAGWGTGPANDKKIVSGEPAEPDTWADQGAKKDTE
GGWNNAAAAVDTGAAKPAEQDKSCWNAPPAVENDSSGWGGWGTGNAKDKNIASEGSAEVD
TWADQSGKRDTDGGGASWDKMKVKDHNMQQDQWGHVPTQNVDAQDDPWGSVAGVAQPSTA
KHIDAQNDSWGSMAAKAQTYARDDSWGSVAAKTSTAEPMDTKNDSWGSVAAKASITEPMD
AGNGSWGSVAAKAQTSTAQQESWGNVSASPSDNAWGAAPVSQGPDNSDAKQPDSWDGWGS
AAPVSQGDSSDAKQPDSWDGWGSAQADDSSTDKWKTNASGNNKGWKADGWEAKENRRDQR
DNPGRPPMRPPVERPPRPRYELPAEAKKVLQEIEPIVTMVRKIFRESSDGIRLPLEDEKF
IIEKVLEHHPEKEKKVSGEIDHIMVNKHHVFQDSRCFYVVSSDGTQTDFSYIKCMDNYVR
KNHEEHAELICEMHFKKRNRDRPPTVDGGAAPATEAGASQPAPGEDLEAALPGPPPGTPP
PSAITQQETPASPAAAPEDDLPLPPPPPLTQHEEDGTPEDDLPLPPPPPLPQQEAGAPGS
APEAGAVDDKWAGGGDDKWAGGPDDKWV
NT seq 5847 nt   +upstreamnt  +downstreamnt
atgggggttcttgggttttgggggcgggttttggtccgttcatgccgttcgcgtctctcc
gcgtttgtatggagtgtggttttcgcggcgagttttgggttgcttttggcagggaaaaag
tcgggtcttttcgcgtcgttcctagcgatggaggaggaggaccaatcggcagtgctggtc
gccgaaggtgccatcaagagcataaagcttagcctatccactgaggaggagatatgtgcc
tactctataaatgactgtcctgttactcatcctagtcagcttgggaaccctttccttggc
ttaccactggaaacaggcaaatgcgagtcatgtggtgccacggaaaacggcaaatgcgaa
gggcatttcgggttcattgagctgcctgtacctgtatatcacccgtgtcatgtcagtgag
cttaggcaactactgagcatggtatgtctgaagtgccttcgtatcaagaaaggaaaggtt
aaacagaagaatggaaaggaaaatgtgtcggtaacggcatgtcactactgtcggggtctc
ccggcactatatttgaaggaaatcaagacagaagatggtgcatttcgtttagagttgaga
gcacccccaaagaaacatatgacagaacgctcttgggacttccttgacaaatatgggggg
tttcaccatggtggagcctctcactgtaggacattgcttccagtagaggtaataatttca
ccttgttctgttttcaagatgttatttgtacttactggagacccgtatattggagcagat
gtagttggactgccttctgaagtggcaaaaagaattacttttgaagaacaggttattgtt
ttgaagggtcctcaagacgcaaagagatttgcagttagcacagattcatctcatttgtca
acaaagcaatggctcgaaaagatgagaacactttttatcagcaaaggatcaggattttca
tcacgcagtgtacttactggagacccgtatattggagcagatgtagttggactgccttct
gaagtggcaaaaagaattacttttgaagaacaggttacagatatcaacataaatagattg
caagaggttgttgacaaggggttgtgtttgacttatagagatggtcaaacaacatatgca
atcactgtaggatcaaaaggatataccactcttaaagtgggtcaaacgatcagtagaaga
attgttgatggtgatgttgtgttccttaacaggccacctagtactcacaagcattctctc
caggcatttactgtatacatccatgatgatcatactgtcaaaatcaacccccttatatgc
tctcctcttgcagcagattttgatggtgattgtgtgcatatttattatcctcagtcactt
gctgctaaagcggaagcattggaacttttcagcgtggagaagcaactgactaattcacac
aacggaaaagtaaatctccagctagcgaatgacagcttgcttgctctgaagcacatgtct
tctagaaccatgttaagcaaagaatcagcaaaccagctggcaatgctcctgtcgctttct
cttcctccccctgctgtggtcaagtctaagccatgctggacaatcgcacaaataatgcaa
agtgcgttgccagcagaattgacatgtgaaggggatagattcctagttagggacagcact
gtcataagactggatattgacaaagaatccgttcaggcctcgttttcggacttggtgtcc
tccattcttgctgtcaagggaccaggagatgcgctcaagtttttgaatgcgctgcaaccc
cttctgatggaattcttgcttctggatggctttagtgtaagcctgcaagattttagtgta
cccaagcctttgttggaagaagcacaggagtgtattaaaaagcagtctcttgtactggag
cagtcaaggtgctcgagtagccagtctgtggaaacaagagttgacaacaatctgaaggac
gtcaaacaacaaattgcagattttgtcgtgaaatcctctcgtcttggtcttctcattgac
ccaaagagtgactcttcagtgtcaaaagttgttcaacagcttgcttttgttggtccgcag
ctctaccgcgaggggaagttctattcaaggtgtctggtggacgattgcttctcaagtttt
gtcaatagacacccaccgattgaagatggagttcaacacccaccagaggcgtatggtctt
gtgcgaagtgcatattttcatggtctcaatccttatgaggagctagtacattctatatgt
acaagagaaactattgtccgctcctcaagagggttgacagaaccaggaactctgttcaag
agtctaatggccatcttgcgagacgtagttatatgctatgatggaactgtgagaaacatc
tgcagcaattcaatcatgcagctgaagtacaaagaagaagatgacacagattttccaagt
gctatagctcctggagaaccggtgggtgtcttagctgccactgctatctccaaccccgct
tataaggctgtcttggactcttctcagagtaataatacttcatgggagttgatgaaggaa
atacttaagacaaaagttagctataaaaatgatgcgaaggatcgaaaagttatcctgttc
ctgaatgactgctcttgccccaagaaattttgcaaagagaaggctgctattgcagtgcag
ggttgcctaaagagagtcacactagaggattgtgccactgacatctgcatcgagtataag
aaacaagttagtttagatgcaatttcagaagccacgccagcatttgttggccatattcat
cttgaaaaggcacatttagaaaagataaacgttagcactgatgagattcttcagaaatgc
caagaagtttctgggaaacatgccaataagaaaggaactcttggtcacctgtttaaaaag
attactttctctacttgtgaatgttcatttgcgcagaagccgggtgatgggaaggttcca
tgtttgcagttctctttttctgaggacatccctatgttatctgattccgttgagaaagca
gtgaatgtgttagctgattctctctgtggtgtgcttctggagataatcataaaaggtgat
cctcgagttcaagaggctaaacttacgtgggttgggtctgatgcaacgtcttgggttaaa
catacaaagaagatatcaaagggtgagcctgcagtagaaattattgttgagaaaaaggaa
gctatgcagaacggtgatgcatggagaattgccatggatgcatgtataccagtcatgaac
ctcattgacacacaaaggtcaataccttatggtattcagcaagtgcgagaacttcttggc
atatcatgctcctttgatcaagttgttcagcgcctttcgaaaaccatgaagacggttgct
aaaggaattctgaaggaccatttggttcttgtggcaaacagcatgacatgcactgggaac
ttgaatgggttccacaatggtggttacagggcgacctttcgttcattaaaagttcaagta
ccttttacagaggccaccttgcttacccctatgaaatgcttcgagaaggctgccgagaaa
tgccattctgattcattgggttctgtggtctcatcctgttcgtggggcaagcatgcagca
cttggtactgggtcatcttttcagattctttggaacgaaaatcagctgaaaagcaacaag
gaatacggtgatggcctgtatgatttcctggccttggtgaggaccgaccaagaaaaggct
gcttacacattcttggatgatgtggactaccttgttgaagacaacgcaatggatgatatt
tgcttatcaccggaaatggatgggatccatggtatgcccacttttgaagatgatcctgaa
cagcaaaatactgagaaggacagctcatgggaaaatggcacaacggcgggtgcaagctgg
gaacaaaatgcaaatgctgggaatgattctggtaactggggaggaggctcaacagtggag
aatgattccactgattgggcaggctggggcactggacctgcaaatgacaaaaagattgta
tccggagaaccagctgaacccgacacttgggctgaccagggtgctaaaaaggatacggaa
ggaggctggaataatgcagctgcagctgttgacacaggagctgcaaaaccagcagagcaa
gacaagtcatgttggaatgcgcccccagcagtggagaatgattcctctggttggggaggg
tggggcactggaaacgcaaaggacaaaaatattgcatctgaaggatcagctgaagtcgat
acttgggccgatcagagtggtaaaagggatactgatggaggtggtgctagctgggacaaa
atgaaagtgaaggatcacaatatgcagcaagaccaatggggtcatgtgccaacccagaat
gttgatgcacaggatgatccatgggggagtgtagcaggtgtggctcaaccttctaccgca
aagcatattgatgcacagaatgattcctgggggagcatggcagcgaaagctcaaacttat
gcaagggatgattcctggggaagtgtggcagctaaaacttccactgcagagcctatggac
acaaagaatgattcctggggaagtgtggcagctaaagcttctatcacagagcctatggac
gcagggaatggttcctgggggagtgtggcagcgaaggctcagacttctactgcacagcag
gagtcctggggtaatgtgtctgcttcaccatcagataatgcgtggggtgctgctccagtt
tcccagggacctgataactcggatgcaaagcagccagattcttgggatggttggggttct
gctgctccagtttcccagggagatagttcagatgcaaagcagccagattcttgggatggc
tggggttctgctcaagccgatgactcgagtactgataaatggaagaccaatgcttctggc
aacaacaaaggctggaaagcagatggatgggaggccaaagaaaaccggagggaccaaaga
gacaatccaggcaggcccccaatgagacctcctgttgagaggccaccaagaccacggtac
gaactgccagctgaggcgaaaaaggttctacaagaaattgaacccattgtaacaatggtc
agaaagatcttccgtgaatcaagtgatggcataaggcttcccctggaggatgaaaagttt
atcatagaaaaagttctggagcaccaccctgaaaaggaaaagaaggtgtctggtgaaatt
gatcatataatggtcaacaagcaccacgttttccaggacagccggtgcttttacgtggtg
tcatcagatgggacccaaacagacttctcatacatcaagtgcatggacaactacgtgagg
aagaaccacgaggagcatgccgagctcatctgtgagatgcacttcaagaagcgcaaccgc
gatcgaccaccaacggtcgacggaggcgcggcaccagccactgaagccggggcgtctcag
ccggctccaggcgaggacttggaagccgctctgccaggcccgccgccaggaactccacct
ccgtctgcgatcacccagcaggagactccagcttctccggctgcggctccagaagatgat
ctgcctctgcctcctccccctccactgacccagcatgaggaggatggaacgccagaagat
gatctgcctctgcctcctcctcctccactgccccagcaggaggctggagcgccaggttca
gcgccagaggcaggagccgtcgatgacaagtgggcaggaggtggcgatgacaagtgggcg
ggaggcccggatgacaagtgggtctag

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