Triticum urartu (red wild einkorn wheat): 125517405
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Entry
125517405 CDS
T08232
Name
(RefSeq) pre-mRNA-processing factor 39-2-like
KO
K13217
pre-mRNA-processing factor 39
Organism
tua
Triticum urartu (red wild einkorn wheat)
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tua03041
]
125517405
Spliceosome [BR:
tua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125517405
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
125517405
NCBI-ProteinID:
XP_048538557
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Position
6:29376488..29384245
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AA seq
784 aa
AA seq
DB search
MENPDGQAGADAGLPPPPPPPLDAAGAGLGSDPAEVLPPPPPHLPGDAPYDAAQGADGSA
YPAEHAALNGTSGDAAGYQAAGATENGAAADEMADPMVPEQSYEDAVGSAEEARLWDVVT
ADCLDFDAWTALIEETERIAESNILKIRKVYDAFLAEFPLCFGYWKKYADHEGRLDGVNK
VFEVYERAVLAVTYSVDIWCNYCQFAISTYNDPDVIRRLFDRGLAYVGTDYRSNTLWDEY
IKYEESLQAWSHLAVVYTRILEHPIQQLDRYFNCLKELTATRSLSEILTAEETSMYCLTV
ENSAAVLDGEAHPNDVEKTAEPEVSSSTEAEDKAKYISIREELYTKAKEYESKISSFEHA
IRRPYFHVKPLDKPELENWHSYLDFIEREEDINKVIKLYERCVIACASYSEFWIRYVQCM
EDRQSLELANNALARATHVFVKKQTEIHLFSARFKELTGDTDGARAEYQHLHSVLYPGLL
EAIVKHANMEHRLGDKESACLVYEKAIAAEKEKEQSQLLPMLLIQYSRFLYMVGDLEKAR
EISGGLHGLANLTKPVLEAVIFLESIFQSEKRIDLLESLVEKFLTAEQTQGELASLSDKE
ELSSIYLEFLDTFGDVQSIKKATTRHTILFSRKRSTLPSKKRRADDAVMSGRDKMAKTGD
GTQPGMGTDPNAHNPAVWPATSEASVQQWGAAYAQQAAYPAYGAYDYSQQMPQSAPQAAA
YGAYPPTYPAQAYPQQSYAQPAAMPVAAAVPTPAQAPAPAAAYPQQPAVAAAPQAYYGGA
ATYY
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccccgacgggcaagcgggagccgacgcggggcttcccccgcccccaccgccg
cccctggacgccgcgggggcgggtctgggcagcgacccggccgaggtgctcccaccgcca
cccccgcatctcccgggcgacgccccgtacgacgcggcgcagggggccgacggatccgcg
tacccggccgagcacgccgcgctgaacgggacctccggcgacgcggcgggctaccaggcc
gcgggggccacggagaacggcgccgccgccgacgagatggccgaccccatggtgcccgag
cagtcgtacgaggatgccgtgggttctgctgaagaggctaggttatgggacgttgtcacc
gcggactgcctggactttgatgcttggaccgcgcttattgaggagacggagaggattgcg
gagagcaacatattgaagatacggaaagtgtatgatgccttccttgcggagttccctctc
tgctttggctattggaagaaatatgcagatcatgagggccgtctagatggtgttaataag
gtgtttgaggtgtatgaacgcgcagttcttgcagttacttattcagtggacatatggtgt
aattattgtcagtttgcgatttcaacatacaatgacccagatgtcatcagaagactgttt
gatcggggtttggcatatgttggaacagattatcgttccaatactttgtgggatgagtac
atcaagtatgaggaatcacttcaagcatggagtcatctagctgtggtatacacaagaata
ttagagcaccctatacagcagcttgatcggtactttaattgcttgaaggagttgactgca
acacggagcctgtcagaaatacttactgctgaggaaacttctatgtattgtcttactgtt
gagaatagtgctgcggtacttgatggagaggcacatcctaatgatgtagaaaaaactgca
gagcctgaagtttcatcttcaacagaagcagaggacaaggcaaaatatatttccattaga
gaagagttgtatacgaaggccaaagagtatgaatctaagattagtagttttgagcatgct
attagaagaccatactttcatgtcaagcctcttgacaaaccagagcttgaaaattggcac
agctatcttgattttatcgagagggaagaagacattaataaggttatcaagttatacgaa
agatgtgttattgcttgtgctagctattcagaattctggatccgctatgtgcaatgcatg
gaggatagacaaagcctagaactggcaaacaatgctcttgctcgtgccactcatgtgttt
gtcaagaagcagacagagatccatctgttcagtgcaagattcaaggagcttactggtgat
actgatggagcacgtgcagagtatcaacatctccactcagtgttatatcctggcctcctc
gaagccattgtgaagcatgctaatatggagcaccggctgggagataaggaatctgcttgt
ttagtctatgagaaagccattgctgctgaaaaggagaaggagcagagccagcttttacca
atgctactgatccagtactcacgtttcttatatatggtcggtgacttggaaaaggcaagg
gagatctcaggtggactgcatgggctagctaaccttactaaaccagttcttgaggctgtc
atctttcttgagtcgatctttcagtctgagaagcgtattgatttgttagaatcactggtg
gagaagtttcttacagctgaacagactcaaggggagctggcaagcttaagtgacaaagaa
gaattatcttccatatatttagagtttttggatacgtttggggatgtacagtcaatcaag
aaggctacaactcgacatactattctcttttcacgtaaaaggagcactctgccatcaaag
aaacgaagagcagatgatgctgtcatgtccggtagagataaaatggccaaaaccggagat
ggcacccaaccaggcatgggaactgatccaaatgctcataatcctgcagtttggcctgcg
acttctgaagcatcagtgcagcaatggggggctgcttacgcacagcaggctgcttatcct
gcatatggagcttacgactacagccaacaaatgccccaatctgctcctcaagcagccgct
tatggtgcctatcctcccacataccctgcccaggcctacccgcagcagagctacgcacaa
cctgcagcgatgcccgtggcagcagcagtgcccacccccgcacaggcgccggcacctgca
gcagcttaccctcagcaacctgccgtggctgccgccccccaagcttactatggcggtgcc
gccacgtactactga
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