Triticum urartu (red wild einkorn wheat): 125517516
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Entry
125517516 CDS
T08232
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
125517516
Enzymes [BR:
tua01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
125517516
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
RhgB_N
Motif
Other DBs
NCBI-GeneID:
125517516
NCBI-ProteinID:
XP_048538678
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All DBs
Position
6:73209885..73212130
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AA seq
629 aa
AA seq
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MQVVVDNGLVQVSLSRPGGHITGVRYGGEGTNLLHSSRSRNTGGYWDMVWDIPGSDQRDL
LNSLDGSEFRVVTQSDDQVELSFRSTYSPERRNAVRLNVDKRLVMLKGSSGFYSYAILEH
GADTPAIDITQARLAFKLNTDRFNYMAISDDVQRYMPRAADRDSSRSSPLAYKEAVLLVD
PAEPQFKGEVDDKYLYTLDTKDNRVHGWVSTSNGQPSHVGFWLVTPSSEFKSGGPLKRDL
TSHVGPTCISMFHGRHYVGNDIVARIGDGEQWKKVMGPVFVYLNSNSEKGDPRALWEDAK
ATAQAEAAKWPYSFPESPDFHKAGERGSVTGRLLVRDKYVSRENMPARAAYVGLAAPGQP
GSWATESKGYQFWTTASNTSGEFTIGNVRAGEYNLYAWVPGVLGDYMNTTRVTVTPGGAI
NLGDLVYEAPRSGPTLWEIGVPDRSAKEMFVPDPDAKYLNKLFQNKDRYRQYGLWERYAQ
LYPTDDLVYTVGESHHSKDWYFAHVTRKAGDDIVPTTRQIRFRMGRVVPGGTYTLRVALA
AAHAARLQVQVNGGTRRGGGIFGTPAFGDGNAIARHGDHSTQWSFEFPISGRLLREGDNI
IHITQTRANSIFLGVMYDYIRFEGPPGSS
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtggtggtggacaacgggttggtgcaggtgtcgctgtcgaggcccgggggccac
atcaccggcgtccgctacggcggggaagggaccaacctgctgcactccagcaggagcaga
aacactggcgggtactgggatatggtgtgggacatccccggctccgatcaacgagacttg
ctcaattcgctggatggctcggagttcagggtggtaacgcagagcgacgaccaggtggag
ctgtcgttccggagcacgtacagcccggaacgtcggaacgccgtccggctcaacgtcgac
aagaggctggtgatgctcaagggcagctccgggttctacagctacgccatcctggagcac
ggcgcggacacgccggccatcgacatcacccaggcccggctcgccttcaagctcaacacg
gacaggttcaactacatggccatctcggacgacgtacagcggtacatgccgcgggcggcc
gaccgagactcgtcccgcagctccccgctggcgtacaaggaggccgtgctgctggtcgac
ccggcggagccgcagttcaagggggaggtggacgacaagtacctgtacacgctggacacc
aaggacaaccgggtgcacgggtgggtcagcactagcaatggccagccgagccacgtcggc
ttctggctcgtcaccccgagcagcgagttcaagagtggcgggccgctcaagcgagacctc
acctcgcatgtcggcccgacgtgcatcagcatgttccatgggaggcactacgtcgggaac
gacattgtggcgcgcatcggggacggcgagcagtggaagaaggtcatgggccccgtgttc
gtctacctcaactcaaactcggagaagggagacccgcgggcgctctgggaggacgccaag
gcgacggcccaggccgaggcggccaagtggccctacagcttcccggagtcgccggacttc
cacaaggccggcgagagaggctccgtcaccggccgattgctcgtaagggacaagtacgtg
agcagggagaatatgcctgctcgggcagcttacgtcggcctggccgcgcccgggcagcct
ggctcgtgggcgacggagagcaagggctaccagttctggacaacggcgtcgaacacttcc
ggcgagttcaccattggcaacgtccgggcaggggagtacaatctctacgcgtgggttccc
ggggttctcggcgattacatgaacaccacccgcgtcaccgtaacacccggtggtgcaatc
aacctcggcgatcttgtgtacgaggccccgagatcagggccgacgctgtgggagatcggc
gtccctgaccggagcgcgaaggagatgttcgtccccgaccccgacgcgaagtacctcaac
aagctcttccagaacaaagacaggtacaggcagtacgggctgtgggagaggtacgcccaa
ctgtacccgacggacgatctcgtctacaccgtcggcgaaagccatcactccaaggactgg
tacttcgcacatgtcacaagaaaggccggcgacgacatcgtgccgacgacgcggcagatc
cggttccgcatgggccgcgtcgtgcccggcggcacctacaccttgcgcgtggcccttgcg
gccgctcacgcggcgaggctgcaggtccaggtgaacggggggacgaggcgtggtggcggc
atcttcggcacgccggcgttcggcgacggcaacgcgatcgcgaggcacggcgaccacagc
acgcagtggagcttcgagttcccgatcagcgggagactgctccgggaaggcgacaacatc
atccacatcacgcagacgagggcgaacagcatattcttaggggtcatgtacgactacatt
cggtttgaaggacctcccggttcttcctag
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