Triticum urartu (red wild einkorn wheat): 125519052
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Entry
125519052 CDS
T08232
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03018
RNA degradation
tua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125519052
09123 Folding, sorting and degradation
03018 RNA degradation
125519052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125519052
03041 Spliceosome [BR:
tua03041
]
125519052
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125519052
mRNA degradation factors
5'-3' decay
Lsm complex
125519052
Spliceosome [BR:
tua03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
125519052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
125519052
NCBI-ProteinID:
XP_048539901
UniProt:
A0A8R7V8Z1
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All DBs
Position
7:complement(535463424..535465609)
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AA seq
104 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAIEFEREQDDPLKL
STKTRQLGLIVCRGTAVMLVSPTEGTEEIKNPFQEADGEQTAHS
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcggaaggagacggtgctggacctggccaagttcgtcgacaagggcgtccag
gtcaagctcaccggcggcaggcaagttacaggaactttgaagggctatgaccagcttctg
aacttggtgcttgatgaagcgattgagtttgaaagagagcaagatgatccactgaaactg
tcgacaaaaaccagacagcttggtctcattgtctgcaggggcacagcggtgatgctcgta
tcgccaaccgagggaacagaggagatcaaaaaccccttccaagaggctgatggagaacaa
accgctcactcctaa
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