Triticum urartu (red wild einkorn wheat): 125519287
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Entry
125519287 CDS
T08232
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125519287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tua03021
]
125519287
03036 Chromosome and associated proteins [BR:
tua03036
]
125519287
Transcription machinery [BR:
tua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125519287
Coactivators
SAGA/TFTC/STAGA complex
125519287
Chromosome and associated proteins [BR:
tua03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
125519287
STAGA complex
125519287
TFTC complex
125519287
SAGA complex
125519287
SLIK complex
125519287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
TFIID_NTD2
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_Nup120_160
RecX_HTH3
RAB3GAP2_N
PALB2_WD40
Cytochrom_D1
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
125519287
NCBI-ProteinID:
XP_048540104
LinkDB
All DBs
Position
7:648129654..648135993
Genome browser
AA seq
609 aa
AA seq
DB search
MEDEEMERKVQQYLHRKGFRLAELALQEERNRHSTTSLSDVSLSRSDNDPARYHDGYNKL
RTWAYSSLDQYKHELLRILYPVFIHCFMDLVSEGHTLEATMYSYELLLQYLQKTQALVML
GIINERIIFEVSAGQPSLISDDADAVALVGTSKDLAKQINQKEVHWGLLEDSVEERMEKA
LSDSDKTEADSKDADAEDNNKKKSSEGGKQGGSLTKKLKKDKLVGATGKNTKSETSMISA
APRVKPELTLPAMPVEVEQSMLDDLRNRVQLNNLALPSVSFYTFLNTHNGLNCSSISNDG
SLVVGGFSDSSVKVWDMAKIGQPAKTSTSQGENGSSQGEHLSSTSEGKRPYTLFQGHSGP
VYSAAFSPFGDFLLSSSSDSTIWLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASASH
DRTAQIWSMDKIQLLRIMAGHLADVDCVQWHVNCNYIATSSSDKTVRLWDVQTGECIWMF
IGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTGCCVSPLAGHNSCVWSLAFSCEGAL
LASGSADCTVKLWDAASSTKALKMDDTQAGSTNRLRLLKALPTKSTPVYNLRFSRRNLLF
ATGALSLGS
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaggagatggagaggaaggtgcagcagtacctgcaccgcaagggattccgc
ctcgccgagcttgcgctgcaggaggagcgcaaccgccactccacaacctccctctccgac
gtctcgctctccaggtcagataatgatccagcaagataccatgatggctataataaatta
agaacatgggcatacagttctctggatcaatacaagcatgaattactccgcatcctttat
ccagtgttcatccattgcttcatggatctagtgtcagagggacacacactagaagctacg
atgtattcatatgaattactcctccagtatctccagaaaacacaagctcttgtgatgctt
ggaataatcaatgaaaggataatttttgaagtatccgctgggcaaccttcattgatctct
gatgatgcggatgctgttgctcttgttggaactagtaaggacttggcaaaacagataaat
cagaaggaagtgcattgggggttgcttgaagattcagtcgaggagcgtatggagaaagca
ctctcagattctgataaaactgaagcagacagcaaggatgcagatgcagaagataataac
aagaaaaaatcctcagaaggtggaaagcagggtgggtctcttactaaaaagctcaaaaag
gataagcttgtaggtgcaacagggaaaaataccaaatccgaaacaagcatgatttctgcg
gcacctcgtgtgaaaccggagctaacccttccagcgatgcctgttgaagttgaacaatca
atgcttgacgacctaagaaaccgtgtacaattgaataacttggcattgccatctgttagc
ttctacacattccttaatacacataacggattaaactgctcatcgatctcaaacgatgga
tcattggttgttggtgggttctcagactcatcagtaaaggtttgggatatggcaaagatt
ggtcaacccgccaaaacatctacttcacaaggagagaatggatcttcgcagggtgaacac
ttgtcatcaacatctgaggggaaacgaccttatacattattccaaggtcattctggacca
gtttattccgctgcctttagtccatttggagattttctcctgtcatcatcttcagattca
acaatttggttgtggagtaccaagctgaacgccaatcttgtttgttacaaaggacacaat
tacccagtttgggatgtccaatttagtccagtcggacattattttgccagcgcctcacat
gacaggactgctcaaatctggtcaatggataaaatccaacttttgcggataatggctggg
catcttgctgatgttgattgtgtgcaatggcatgtaaactgtaactacattgccaccagt
tctagtgacaaaactgtaaggttatgggatgttcaaactggtgaatgtatatggatgttt
attggtcataggagtatggtcttgtcactggcaatgtctcctgatgggcgatacatggcc
tctggagatgaagatgggaccatcatgatgtgggatctctctactggttgctgtgtttca
ccactagcgggacacaactcttgtgtgtggtcgcttgctttcagctgcgagggagcattg
cttgcatctggatcggctgattgcaccgttaaactctgggatgctgcgtccagcacaaag
gccctgaagatggacgacacccaagctggttctacaaaccgactgaggttgctgaaagct
ctccctacaaaatcgactcctgtttataacttgcggttttctcggaggaatctcttgttt
gcgaccggcgctctctcgttaggatcctaa
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integrated database retrieval system
