Triticum urartu (red wild einkorn wheat): 125519304
Help
Entry
125519304 CDS
T08232
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125519304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tua04131
]
125519304
Membrane trafficking [BR:
tua04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
125519304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
Beta-prop_EML_2
Beta-prop_EML
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
Clathrin
WDR55
VPS8_N
TPR_Vps41
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_Prp19
Beta-prop_THOC3
Beta-prop_HPS5
Beta-prop_Aladin
WD40_Gbeta
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
125519304
NCBI-ProteinID:
XP_048540112
LinkDB
All DBs
Position
7:653622598..653724146
Genome browser
AA seq
1678 aa
AA seq
DB search
MRQRAVGSAGQSAEALEAASSATSRWTPSAGTGELNVAAQEVQSRLQTQAALLQQYTQEF
LSTRAAIRAQELGRKTDDLANSRRANADLRKELGEAQATLRTSDAEYAALSIFLVVKKHL
STPKLAPPHLGETATVSLVPSSSPAMASQPPPPPHELDLEAFLPSSPASSDADADADADH
RRAVDDLLLLLSSSSSDSDDEPTRTPSTNHKALTRIKAPPPPAKPSPSPLPSPSASPRRS
TSASPSATLSSLAPRTFSNAAAASSRPLPSLFRDVRPSPKPGAALAAAAAASRAVLTPHA
AAVRSRRTASAPIEKLLDQASEAEEVADKASEEVVARVTVETVGGDGVEELEEDKKHGEV
GTEENSKPSESVGGGNVDSGAAENFDVQEQLGSQIGLVDQENSDEQIRDGNLVESVEIVD
QDGSVSDEKTEDGLEVEVECSDTDLEEQAESEGIIDRVVEERLEMSRMAEENAEERRKAP
MKQLKRAEEFEKRQASFGQHWEEGAAAQPMRLERIGKGQPAIGYMQIEVDNPITRAMASP
SFRQEHGSPQVLAVHRSYIATGMSNGSVIIVPSEYSIHQADDTDAKMLFFWNQGVKTQSP
VTAMCFNPQGDLLLVGYGDGHMTIWDVQKATAAKVIYGGHTAVVHVCFICQSKAITGDSK
GLVLLHTFLIIPVINRLTVKGTQRLFDGHTGIVLSACPLLADESFGSGNSSMQGNLITSS
SGGLGSMMGGLVGVDSGRKFFNEGSSPMEDGVTVMFIMHQHALVVRLRTNSDHVDHIETF
SRPEGAREGSIAYAAWKYTSSSSDSSPIDEEPVSWLALVWDRQVQVAKFVKSKVIKHKDW
NHDSAAVGVAWLNDQMLAVLNLRGQLCLFSKDGSELRRTIFILDGLVFDDSILYHTHFSN
RFGNPERHFNNSVAVRGATVYILGPSFLTVSPLLPWKEWIEALKRAGDWMGAMDMAMKLY
DGHTQGVIDLPRTVDSIREAIMPYLVELLLSYIGYVFEYISIALSNHTGKGGAADGLIDA
DRSLLTEREEQYARVGGVAVEFCVHIGRNDILFDTVFSKFVAAQSGGMFLEVLEPYMLKD
MLGSLPPEIMQALVEHYSGKGWLQRVEQCILHMDISSLDFNQVVRLCREHGLYGALIYLF
NQGLNDFRSPLEELLSVIQNATRKDATCYRMLVYLKYCFQGLAFPPGHGIIPRAQLHSVR
KELLQFMLEESKMHTSEVFKGFSSSSGKCPNICYLLWMDTEATLEVVKCAFAQENFESTS
STPDASVSKDEDDTNIERESQNILLQGVVDTIIHIVGLENEAIHSIVVGTAESEESELWP
TVNDFGYIIEFVSFFISNKRAKSSQRVLKHILKYLTSSSTPSYDDKKMPTQKEVLQLFNV
VPQTDWNYDYVLHLCLDAHFHQACGRIYAARNQNLSALDSYMKDIVEPYHAFIFINKKLF
QLAGDEALSFRSTVISCFAELVNLSRECAFVLFLDHFQNQIQQILSMLPSHSRSHFLFLK
TAMEVDLSGKLDVSALTGNEIVERLYFSGELEDYLQRLSNFPKFDCNLVSMIDELFEPYL
KLLCQYEPRSVLKFLETFDSYRLVGCLQLCLDYGVTDAAAFLQERAGDAQSALALVLAGL
DEKTSQFITSVENTFSQRVNWIYATTIFVSWKYAITKAQVGNMPLQLPRTSIYAIFST
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagcgcgcagtggggagcgccggccagtcggcggaagctttggaggcggccagc
tccgccacgtccaggtggactcccagcgcggggactggcgagctgaatgtggcggcccaa
gaggtccagagccggcttcaaactcaggccgcccttctgcagcaatatacccaggagttc
ttgtcgacgcgggccgccattcgggctcaggagttgggtcggaaaaccgacgatctggcc
aatagccgaagggccaatgccgacttgaggaaggagctcggcgaggcgcaggccaccctc
cgcaccagtgacgctgagtacgccgccttgtcaattttcctcgtagtaaaaaaacatctc
tcaactcccaagctggcaccaccgcacctcggcgagacggcgaccgtctccctcgtgccg
tcgtcgtcgccggcgatggcgtcccagccaccgcctccaccccacgagctcgacctagag
gcgttcctcccgtcgtctcccgcctcctccgacgccgacgccgacgccgacgccgatcac
cgccgcgccgtcgacgacctgctcctcctcctctcctcgtcctcgtccgactccgacgac
gagccaacccgtacgcccagcaccaaccacaaagctctgacccgcatcaaagccccaccg
ccgcccgctaaaccttccccatctcctctgccatcgccttccgcgtccccccggagatcc
acatccgcatcgccgtcggcgacgctctcctccctcgccccgagaaccttttccaacgcc
gccgccgcctcgtcgaggccgctcccctcgctcttccgggatgtccgccccagccccaaa
cccggcgccgccctcgctgccgccgccgccgcgtcccgtgctgttctcaccccgcacgcc
gctgcagttaggtcgcggcgcaccgcctccgcgcccatcgagaagctcctcgaccaagcc
tccgaggcagaggaagtagctgacaaggccagtgaggaagtggttgctagggtgaccgtg
gaaactgtcggcggggatggggttgaagaattggaagaggacaaaaaacacggagaagtg
gggactgaagagaattccaagccctcagaatcggtgggcggaggcaatgtcgattctggt
gccgcggagaatttcgatgtgcaggagcaacttgggagtcaaattgggcttgttgatcag
gaaaatagtgatgagcaaattagagatggaaatttggtggaatctgttgagattgtggat
caggatgggtcagtgtccgatgaaaagactgaggacgggctagaggttgaagttgaatgt
tctgacactgatttggaagagcaagcggaatctgaggggatcatcgatagggtggtcgaa
gagaggttggagatgagcaggatggctgaagaaaatgcggaggaaaggcgaaaggcacca
atgaaacagttgaagcgggccgaggagttcgagaagaggcaggcctcatttgggcagcac
tgggaggagggagcagcggcacaacccatgcgcctggagaggattgggaagggccaacca
gctattggttacatgcagatcgaggtggacaacccgataactcgtgccatggcttctcca
tcttttagacaggaacatggctctcctcaggtcttagcagtacataggagctatattgcg
acgggtatgtccaatggatctgttatcattgtcccaagcgaatactccatccatcaagct
gatgatacagatgcaaagatgttgttcttttggaaccaaggtgtgaaaactcaatcacca
gtgactgccatgtgctttaacccgcaaggggatcttctgctagtaggatatggtgatggt
catatgacaatttgggatgtacagaaggctactgcagcaaaagtcatatatggtgggcat
acagctgtagtgcatgtttgttttatctgccaatctaaagccatcactggtgattcaaaa
gggcttgttcttctgcacacattcttgattatccctgtcattaatcgcttgactgtcaag
ggaacccagcgcctttttgatggacatactggaatcgtgctctcagcctgccctcttcta
gcggatgaatcctttggttctggcaactcatctatgcaaggcaacctaataacttcctcg
agtggtggtcttgggagcatgatgggaggtttagttggagtagattctggacggaagttt
ttcaatgaaggttcttctccaatggaggatggtgttacagtcatgttcattatgcatcaa
catgctcttgtggttagactccgcaccaacagtgaccacgttgaccatattgagaccttc
tctagaccagaaggagcacgagaagggtcaattgcctatgctgcatggaaatacacatca
tcctcgagtgattcatcgccaattgatgaagagccagtatcttggcttgcgcttgtctgg
gaccgtcaagtgcaagtggcaaagtttgttaaatcaaaggtgatcaaacacaaggactgg
aatcatgatagtgccgccgttggtgttgcttggttaaatgatcagatgttagctgtcctt
aacttgagagggcagctctgcctgttctcaaaagatggcagtgagcttcgcaggactatc
tttattcttgatggtttggtcttcgatgacagcatactgtaccatacacatttttctaac
aggtttggtaaccctgagaggcattttaacaactcggtagcagtaagaggtgctacagta
tatattcttggcccaagctttcttacagtttcgccacttcttccatggaaagagtggatt
gaagcactaaagagggctggtgattggatgggtgcaatggacatggcaatgaagctttat
gacggtcacacacagggtgttattgatcttccgagaacagttgattccataagggaagcc
ataatgccgtatctagtagagttgctgctgtcatatataggttatgtctttgaatatatt
tcaattgcattgtcaaaccatactggaaaagggggagcagcagatggcctgatagacgcc
gatagatcactgctgacagagagagaagaacaatatgctcgtgtaggaggggttgcagtc
gagttttgtgttcacattggacggaatgacatcctgtttgatacagtcttctctaagttt
gttgctgctcaaagtggaggtatgtttctggaggtactagagccatatatgttgaaagat
atgcttggttctttaccacctgagatcatgcaagctctagtagagcattatagtggcaaa
ggatggttgcagcgagtcgaacaatgcattcttcatatggatatttcatcactggatttt
aatcaggtagtcagactctgtcgtgagcatgggttatatggtgctctaatatatttattt
aaccaaggcttgaatgatttccgttcacctctagaggaacttctatctgttatccagaac
gctactagaaaagatgctacttgctacagaatgcttgtttatctgaagtattgcttccag
ggcctagcatttcctccagggcatggaataattccccgagcgcagcttcattcagtgaga
aaagaacttctgcaattcatgcttgaagagtctaaaatgcacacttctgaagtatttaag
ggtttcagttcttcttccggaaaatgcccaaacatatgctatctactatggatggatacg
gaagctactctggaagttgtcaagtgtgcttttgcacaagagaattttgaatctacttct
agtactcctgatgcatctgtgtccaaggatgaagatgataccaatattgaaagagagagt
caaaatatcttattgcaaggtgtagtcgacaccatcattcatattgttggtttggaaaat
gaggcaatccattccattgttgtgggtactgctgagtcagaggaatcagaactttggcct
acagtgaatgattttggttatataattgaatttgtgtccttttttatttccaataaaagg
gcaaagtcatctcaaagagttcttaagcacattcttaaatacctcacgtcatccagtact
ccatcatatgatgataaaaagatgccaactcagaaagaagttcttcagctcttcaatgtg
gttcctcaaactgactggaattatgattatgtgttgcatctttgtttagatgcccatttt
catcaggcatgtggcaggatatatgcagccagaaatcaaaatttgtctgctttggatagt
tacatgaaggatatagtggaaccataccacgcttttatcttcatcaataaaaagttattt
cagttggcaggcgatgaagctttgtcgtttcgttctacagtaatatcttgtttcgccgag
ctagtcaatctaagcagggagtgcgcatttgtcttgttccttgatcattttcaaaatcag
atccagcaaatattgtcaatgcttccttctcacagccgcagccactttcttttcttgaaa
actgcaatggaagtagacttgtcaggcaaacttgacgtcagcgcactaactggcaatgaa
attgttgaacgcctgtacttctctggtgaactcgaagattatctgcagagattatcaaat
ttcccaaagtttgactgcaatcttgtttctatgattgatgagttatttgaaccttatctg
aagcttctgtgtcagtatgaaccaaggtcggtcctgaagtttctggagacttttgatagc
tacagattggtagggtgtttgcagttatgtctagattatggagttacagatgctgctgca
tttctgcaagagagggctggtgatgctcagagtgcactggcacttgttctagctggacta
gatgagaaaactagccagtttatcacttcagtggagaatacgttttctcagagggttaat
tggatctatgccactacaattttcgtaagttggaaatatgccattacaaaagctcaagtt
ggaaatatgccactacaacttccccgtacatctatctatgccattttctcaacttaa
DBGET
integrated database retrieval system
