Triticum urartu (red wild einkorn wheat): 125520872
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Entry
125520872 CDS
T08232
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125520872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tua04121
]
125520872
Enzymes [BR:
tua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125520872
Ubiquitin system [BR:
tua04121
]
Ubiquitin ligases (E3)
HECT type E3
125520872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
HEAT_EZ
Htt_N-HEAT_1
Adaptin_N
HEAT_2
RGM_N
HEAT
Motif
Other DBs
NCBI-GeneID:
125520872
NCBI-ProteinID:
XP_048541876
LinkDB
All DBs
Position
1:complement(481769868..481778128)
Genome browser
AA seq
1515 aa
AA seq
DB search
MDRCRKRPDSDPGGSGEAETPADKRPCTAEPSTSAAAAPAPPEQAASDMDTSSSGHAAEA
DADADVDGDDGDGDGDGDGGSSCESDGDGGPGSGKFRRMVAAVASEGAGGGALLASLTEL
CEALSFCTEDAGGYFPVESAARALVRLAGADVASPDELLLAVRAITYLCDAMPRAADAVV
RHGLLPVLCSRLLAIEYLDVAEQCLQAFEKISLRQPAQCLQAGMITAVLAYIDFFSASIQ
RVAVSAVANACKKVPADCSQFVMDSIPMLCNLLQSEDKMVLEKVATCLISIVDSFSGSVE
LLDQLCHQGLVEKVLPLINASGLTSLNPSTCSNLIGLLAKLACTSLVAVKSLFELNVGST
IRGILVSSDLSHGMPYLPSENQNNQVNEALKLAIQLIPSAARDVEDTYIVLAKEKIIVDE
PGFLCQFSTDILPILIKAVNSGANSYICYGCSSIVNNICYFSKPEMLQELLKETNISSFL
AGLLSRKDHHVLISSLKIIEILMQKLPDAYLGSFIKEGVVNAVEALLMQEDCSKSSPPLS
DDTQQSENQPVIRNKPTCFCYAFDSRQSESAETRACRIGQGNLFNFARHVKTTYFTAEAV
NSEMGLTEILQKLKTCCAVLNDSADKSFNQDSLQNEEHLSTILSEVMMELHGGETMTTFE
FLESGLVKSLLNYLSNGKYLQVDDNLKDYNAEHFCAVLKRFQSFARICFSRMEQGWGDML
LTLLVRKLQNALTSLDNFPVIMSHNFKPRNNISDIPIRHSTISPCIRVRFKKDEDETNLS
SYDNSVNLEISSSLHSIEQFLWPKVSTCTSDQNTESPPSSVAFESKCAEDDPQERDSSPE
SSPSSEGIIRENQNSYVEPCSKKGSPSSAGGQPERNKSTGTDCAFQPKLVFSLKGKELDR
SVTLYQSILQDQINAGADVILDTQFWRSVHDITFRTAANPEKDDSPENLSNAAISTNDSK
TGLMWQALPFFSSLLLGKIPCKLDRSNSLYDILFMLKVLEGLNRYSFHLVSNERNHAFAQ
GKLTDLDDLKPSVSSVPLQEFVSAKLTDKLEQQMHDPLVLRSRCLPLWCTELMSACPFLF
SFEARWKYFQLTSFGSSSMQRGHMIDTSGSNISTERGSPISRKKFKVDRDDILASAAKMM
HSYAKSSALLEVEYEEEVGTGLGPTMEFYTLISHEFQKSGLGMWRGELSCEAGTNNAHIG
TVVAPNGLFPRPWSASVDCASFSEINKRFHLLGQVLAKAIKDGRILDIPFSKAFYKLILG
QELNIYDINSFDPELAMTLMEFKALTCQRKYLESCSTRECQSTSDLSYRGCKIEDLVIDF
AVPGYPEYVLSSEGTSDNVTGENLEEYVSFVVEATVKSGITRQLEAFESGFSQVFPLSTL
RAFSEDELERLLCGEQDNWDFVKLVDHIKFDHGYTSSSPAVLNLLEIIQEFGCHERRAFL
QFITGSPRLPPGGLAALNPNLTVVRKHSNNDADDDLPSVMTCANYLKLPAYCSKERMREK
LLYAITEGQGSFHLS
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atggatcgctgccggaagcgccccgactccgaccccggcggctccggcgaggccgagacc
cccgccgataagcgcccctgcaccgccgagccctccacctccgccgccgccgcgcccgcg
ccgccggagcaggccgcctccgacatggacacctcgtcctccggccacgccgccgaggcc
gacgccgatgccgatgtggacggcgacgatggggacggggacggggacggggatggcggg
tcgtcttgtgagtcggatggggacggggggcccgggagcggcaagttccgccggatggtg
gcggccgtcgcctcggagggcgccgggggaggcgcgctgctcgcgtcgctcacggagctc
tgcgaggcgctctccttctgcaccgaggacgccgggggctacttccctgtcgagtccgcc
gcgcgggcgctcgtgcggctggccggcgccgacgtcgccagccccgacgagctgctgctc
gccgtgcgcgccatcacctacctctgcgacgccatgccgcgcgccgccgacgccgtcgtc
cgccacggcctcctccccgtgctctgctcccgcctcctcgcgatcgagtaccttgatgtg
gccgagcagtgcttgcaggcgttcgagaagatatcgctgcggcagccggcgcagtgcttg
caggcaggcatgataaccgccgtgctggcatacattgacttcttctctgcaagtattcag
agggttgctgtctcagctgttgcaaatgcctgcaagaaggtccccgcagattgctcccag
tttgtgatggattcgatcccaatgctgtgtaatctactgcagtctgaggacaagatggtt
cttgaaaaggttgcaacttgcctgataagcattgtagactcttttagtggttcagtggag
cttcttgaccagctctgccaccagggcctggtagagaaggtccttcctttgatcaacgcc
agcggactcacttcccttaacccatcaacttgcagtaacttgatcgggcttcttgctaag
ctagcctgtacttcacttgtggcagtgaagtctctctttgagttgaatgttggtagcacc
ataagggggattttggtcagttcagatctctcccatgggatgccatacctgccttcggaa
aaccaaaataaccaggttaatgaagctctgaaattagcaatccagcttattccttctgcg
gcaagagatgttgaagacacctatatagtacttgctaaagaaaaaataattgtcgatgaa
ccagggttcttgtgtcagttctctacggatatccttcctatcttgatcaaggcagtcaac
tctggtgcaaattcgtacatttgctatggctgttcttcaattgtaaataacatctgttac
ttcagtaaacctgaaatgcttcaagagttgctcaaggaaacaaacatatcaagcttcttg
gctggtttattgtcccggaaggatcatcatgtgctaatctcatcactgaagattatcgag
attctcatgcaaaagcttccggatgcttaccttggatcttttatcaaagaaggtgttgtc
aatgcagtagaggctcttcttatgcaagaggattgctcaaagtccagcccccctctctct
gatgacactcaacagtcagaaaatcaacctgttataagaaataaacctacatgtttctgc
tatgcatttgattcccgccaatctgaatctgctgaaacaagggcttgtaggattgggcag
gggaacctttttaatttcgcaagacatgtgaagacaacttactttacagctgaagcagtg
aattcagagatggggttaacagagattttgcagaagctcaaaacttgctgtgcagttcta
aatgactctgccgacaagtcattcaaccaagacagtcttcaaaatgaagaacacctgtct
accattttgagcgaggtgatgatggagcttcacggaggagaaacaatgacgacgtttgaa
ttccttgagagtggactggtcaaatctttgttaaattacctgtctaacggcaaatacctt
caggtggatgacaatcttaaagattacaatgctgaacatttttgtgctgtgctgaaaaga
tttcagtcatttgcccggatttgtttctcaagaatggagcaaggttggggtgatatgctc
ttgacactacttgtaaggaaactgcagaatgctcttacttctcttgacaacttcccagtg
ataatgagccacaatttcaagccaaggaacaatatttctgatatccctattcgccactca
acaattagtccatgtatccgagtacgtttcaagaaggatgaagatgaaacaaacttatca
agctatgataattctgtgaatttggaaatctcttcttccttgcattctatcgaacaattt
ctgtggcccaaagtcagtacatgcacaagtgatcagaatactgaatcaccacctagtagt
gttgctttcgagagcaaatgtgctgaagatgaccctcaggaaagagattccagcccagaa
tcttctccttcatcagagggtatcatcagggaaaatcaaaattcttatgtagaaccatgc
tcgaagaaagggtcgccatcttccgctggaggtcaaccagaacgaaacaagtcgaccggg
actgattgtgcttttcagccaaaactggtatttagcctgaaaggaaaagagcttgaccga
tctgttactctatatcaatcaatcctgcaggatcagatcaatgcgggagctgatgtaatt
ttggacacccagttttggcgcagtgtgcatgacataacatttcgaacagctgcaaatcca
gaaaaagacgattctcctgagaacctgtctaatgcagcgatatcaacaaatgacagtaaa
actggtttaatgtggcaagcactccctttcttcagcagcttgttgcttggcaagatccct
tgcaaacttgatagatcaaattcattgtatgacatattgtttatgctgaaagttttagaa
ggattaaaccgatactcgtttcacctcgtgtctaatgagagaaaccatgcttttgctcaa
gggaagttaactgaccttgatgatctgaagccttctgtttcttcagttccactgcaggag
tttgttagtgctaaattgacagataaactggagcaacagatgcatgatcccttggtttta
aggtctcgctgtctgcctttatggtgcactgaactgatgtctgcgtgccctttcttattt
tcctttgaggcaagatggaagtatttccaactgacatcatttggttcttcatcaatgcaa
cgtggtcatatgatagatacaagtggtagcaatatatcaacagaaagaggttcacccatt
tcacggaaaaagttcaaagttgatcgtgatgatatactggcttcagctgcgaaaatgatg
cattcctatgctaagagtagtgcactgcttgaagtagaatatgaagaagaagtaggcaca
ggtttaggtcctacaatggagttctatacgttgataagtcatgagtttcagaagtctggt
ttaggcatgtggaggggtgagctttcttgtgaagctggcaccaacaatgctcacattggg
actgtggtcgcgcctaatggattgtttcctcgaccgtggtctgcttctgtagattgtgct
tccttctcggaaataaataaaagatttcacctccttggtcaggttctcgcaaaggcaatt
aaggatggcagaattcttgacattccattttccaaagcattttacaagcttatcctagga
caggagcttaatatatatgatatcaattcatttgatcctgaactcgcaatgacccttatg
gagtttaaagcgcttacttgtcaaaggaaatatttagaatcatgttcgacaagggaatgc
cagagcacatctgatttgtcttatcgtggttgtaaaattgaggatcttgttattgacttt
gctgtcccagggtatccagaatatgtgctttcttcagagggtacttcagacaatgtaact
ggtgagaatttggaagaatatgtttcttttgttgtcgaggcaacggttaaaagtggaatc
acaagacagctggaggcttttgagtcaggattcagtcaggtatttccactaagcacactt
cgggcattctcagaggatgagctggagagattactctgcggagaacaagataactgggat
tttgtgaaacttgtggatcacataaaatttgatcatggctacacctccagcagtcctgca
gtccttaatttgttagagatcatacaagagtttggatgccatgaacgcagagctttcttg
caatttataacgggttcacctcggctccctccaggcggtctggctgcactgaatccaaat
ttgacagttgtcaggaagcatagcaacaacgatgctgatgatgatctgccaagtgtgatg
acttgcgctaactatcttaagttacctgcctactgctctaaggaaaggatgagggagaag
ctactctacgcgattactgaggggcaggggtccttccacctgtcctga
DBGET
integrated database retrieval system
