Triticum urartu (red wild einkorn wheat): 125521665
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Entry
125521665 CDS
T08232
Name
(RefSeq) pre-mRNA-splicing factor syf2-like
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125521665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tua03041
]
125521665
Spliceosome [BR:
tua03041
]
Complex B
Other components
Prp19-related factors
125521665
Complex C
125521665
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
SoxA-TsdA_cyt-c
Motif
Other DBs
NCBI-GeneID:
125521665
NCBI-ProteinID:
XP_048542673
UniProt:
A0A8R7VBG6
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All DBs
Position
7:complement(598919013..598922466)
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AA seq
338 aa
AA seq
DB search
MGKSEPECVNSSNPAHECNDYCLNKIAEAKRRLLEEQPDSWKGPPEDRTVHPDCINASNP
YHDCSEYCFKKIADANAAAERGELEKPAGGSGKSGVTPEQADGDDDSERQEDAAAAEDGY
PQMTEKQKKLFELQLKMNEARKANQQAMVAEKKRMEPRGESRGVSKEKWLEDRKKKIGKL
LDSNGLDMSKSYMLDTQDMAEAKYKKWEKEPAPHGWDVFNQKTLYDAYKKRTKNIEVDMD
AYNRAKETDPEFYREASSLQYGKVSRVAEPNIDRMVNELKERDEKRKAFSRRRKFNEDKD
VDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggggaagtcggagccggagtgcgtcaactcgtcgaacccggcccacgagtgcaacgac
tactgcctcaacaagatcgccgaggccaagcgccgcctcctcgaagagcaacccgactcg
tggaagggccccccggaggaccgcaccgtgcaccctgactgcatcaacgcctccaacccc
taccatgactgctccgagtactgctttaagaagattgccgacgccaatgcagcggcggag
cgcggggagctagagaagcctgctggaggttctggcaaatcaggagtcactccagagcag
gctgatggtgatgatgattccgagcgccaggaggacgccgctgcagcagaagacggttac
ccgcagatgaccgaaaagcagaagaagctgtttgagctgcagcttaagatgaacgaagct
aggaaggcgaatcagcaggcgatggttgcggagaagaagaggatggagcctcgtggcgag
agcagaggcgtatctaaggagaagtggttggaagacagaaaaaagaagattgggaagctg
cttgattcgaatggcctggatatgtcaaagtcttacatgctggatacacaggatatggca
gaagcaaaatacaagaagtgggagaaggaacccgcaccacatggctgggatgttttcaac
cagaaaaccttgtatgatgcatacaagaagaggacaaaaaacatagaagtcgacatggat
gcatacaatagagcgaaagaaaccgatcctgaattctaccgtgaggcttcaagtcttcaa
tatgggaaggtgtctagggtggcggaacccaacatcgaccgaatggttaatgagctcaag
gagcgggatgagaagcggaaggcgttcagcaggaggcgcaagttcaacgaagacaaggac
gttgactcgatcaacgaccggaatgagcacttcaacaagaaaatcgagagggcctttggc
aaatatacgctcgagatcaagaacaacctggaaagagggaccgccttgccagactaa
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