Triticum urartu (red wild einkorn wheat): 125521947
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Entry
125521947 CDS
T08232
Name
(RefSeq) formamidopyrimidine-DNA glycosylase isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125521947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tua03400
]
125521947
Enzymes [BR:
tua01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
125521947
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
125521947
DNA repair and recombination proteins [BR:
tua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
125521947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
NFACT_N
Motif
Other DBs
NCBI-GeneID:
125521947
NCBI-ProteinID:
XP_048542972
UniProt:
A0A8R7VDN2
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Position
7:686911394..686914911
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AA seq
408 aa
AA seq
DB search
MPELPEVEAARRALEAHCVGRRITRCAVADDSKVVVAAAGRVAFERAMVGRTIVAARRRG
KNLWLRLDAPPFPSFQFGMAGAIYIKGVAVTKYKRSAVNSEDEWPSKYSKFFVELDDGLE
FSFTDKRRFARVRLFDDPETVPPISELGPDALFEPMSVDNFVDSLSRKKIGIKALLLDQS
FISGIGNWIADEVLYQSKIHPLQIASSLTRESCEALHQSIQEVVKYAVDVDADCDRFPVE
WLFHHRWGKKPGKVDGKKIEFITAGGRTTAYVPQLQKLTGTQSNKKVVSSPGQVSEDGDA
KEAGTEVEVEADDDLKPRKRVATFKAAKGEQNKDVISAPSKIRRKIAGGKKKQSIEHGSK
DDVKTTGPNKAGAGSNDEHGLDEPAAKMRKVSGRGTRNSSKNKPKTTK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacttccggaggtggaggcggcgcggagggcgctggaggcgcactgcgtgggc
cgccgcatcacgcgctgcgccgtcgcggacgactccaaggtcgtcgtcgccgccgccggg
cgcgtggccttcgagcgcgctatggtgggcaggaccatcgtggccgcgcgccggaggggc
aagaacctctggctccgcctcgacgccccgcccttcccctccttccagttcggaatggca
ggtgcgatctacataaagggcgttgccgtcacaaagtacaagagatcagctgtcaactct
gaggacgagtggccctccaagtactccaaattcttcgtcgagcttgatgatggcttggag
ttttccttcactgataagaggcgctttgcaagagttcggttatttgatgatcctgaaact
gtacctccaatttctgagttaggtccagatgcgctctttgagccgatgtctgttgataat
tttgtggactcactgagcaggaagaagattggaataaaagctcttttacttgatcagagc
ttcatatcaggcattggtaattggattgcagatgaggtgctttaccagtcgaaaatccat
ccattgcagattgcttctagcctaacaagggagagttgtgaagcgctacatcaaagcatc
caagaagttgtgaaatatgctgtcgatgttgatgctgattgtgatcgctttcctgtggaa
tggttgtttcatcaccgctggggcaagaagcctggtaaagtcgatggaaagaaaattgaa
ttcataacagctggtggcaggactacagcctatgtgccacaactgcagaagctgactggg
acccaatctaacaaaaaagtagtgtctagcccagggcaagtgagcgaggatggtgatgcc
aaggaagcagggacagaagtagaagtggaagctgatgatgatttgaagccaagaaagaga
gtggcaacattcaaggctgccaagggagagcaaaacaaggatgtcataagtgccccttcc
aaaataagaaggaaaattgctggcggcaagaaaaaacaaagcattgaacatggcagcaaa
gatgatgtcaagactacaggaccaaacaaagctggtgctggtagcaacgatgagcatggt
ttggacgaacctgctgctaagatgcgcaaggtatcaggccgaggtacaagaaattcgtcc
aagaataaaccgaagactaccaaataa
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