Triticum urartu (red wild einkorn wheat): 125522006
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Entry
125522006 CDS
T08232
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42-like
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125522006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tua03041
]
125522006
Enzymes [BR:
tua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125522006
Spliceosome [BR:
tua03041
]
Complex A
U2 snRNP components
U2 related factors
125522006
Complex B
125522006
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
125522006
NCBI-ProteinID:
XP_048543023
UniProt:
A0A8R7V745
LinkDB
All DBs
Position
7:401943407..401948030
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AA seq
1063 aa
AA seq
DB search
MSSGDDDRVTVSRHHHRDKDKDRDHSSSRRHRDKDRPSSRHHRDDRDGERERDRDRDRHH
RDKERDREERKARERAEKEREKEEKREKEREREREREREEREMEKERERARRREERDREK
EKSRRREAVDEEENEDRDRDRKRRRRSLHRHHHRDVEPEETPLTREEEEDAEEVERRRQK
KEEDMEAEQQRLDDEMERRRRRVKEWQEKKRREQQQEDGASGGAAAIEADGGGKSGKKWT
LDGEESDEEDVKKLEENAGTGAMDVDLPNMDNGSNSGAGLEEDEIDPLDAFMDSMVLPVV
AKLESATTATESVLADNAGGLNDKSVKDATSNEDKKRQMMAIGRIMQGDDSDSDYDDANN
GEAGSDDEDDAEFIKRVKKTKAEKLVIVDHSKIDYQPFRKNFYIEVKDIKNMPAEEAAAY
RKLLELKVHGKDVPKPIKTWIQSGLTSKLLDTIKKLGFEKPMPIQAQALPVIMSGRDCIG
VAKTGSGKTLAFVLPMLRHVKDQPPVVPGDGPIGLIMAPTRELVVQIYSDIKKFSKVLGI
NCVPIYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTFLVLDEADRM
FDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVEILARKVLTKPVEIQMGGRSVVNKDIT
QLVEVRPESERFFRLLELLGEWFANGKILVFVQSQDKCDSLLKELFQHGYPCLSLHGGKD
QNDRESTLADFKSNVCSLLIATSVAARGLDVKDLELVVNYDVTNHYEDYVHRVGRTGRAG
RKGCAVTFISEEEERYAPDLVKALELSEQAVPEDLKALADRFMSKVKQGTEQAHGTGYGG
SGFKFNEEEEEARKSAKRAQAREYGYEEDKSDSDSDDEGGVRKQGGDVAAQAIAAAQAAA
ALAAARATSNAQQQVPATTAGSLLPLPVAPSQQNNEATQRALDAAYNLQKNLARIQAHAV
PEHYEAELEINDFPQNARWKITHKETLVPIQEWTGAAITTRGTFIPQGKIVGANERKLYL
FIEGPNESSVKKAKAELKRVLEDCANQALNLPGSAQTGKYSVL
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccggcgacgatgaccgcgtcaccgtctccaggcaccaccaccgggacaaggac
aaggaccgcgaccactcttcctctcgccgccaccgcgacaaggaccgcccctcctctcgc
caccaccgcgacgacagggacggtgagcgggagcgggaccgagatcgcgaccgccaccac
agagacaaggagcgggatcgagaggagcggaaggcgcgggagcgggcggagaaggagcgc
gagaaggaggagaagagggagaaggaaagggaaagggaaagggagagggagagggaggag
agggagatggagaaggagagagagcgggcgcgtcgtcgcgaggagcgggatagggagaag
gagaagtcgaggaggcgggaggcggtcgatgaggaggagaacgaagatcgtgaccgcgac
cgcaagcgccgccgccggtccttgcaccggcaccaccaccgtgatgtggagccagaggag
acaccgctgacaagggaggaggaggaggatgcggaggaggtggagagacggcggcagaag
aaggaggaagacatggaggctgagcagcagcggcttgatgacgagatggagcggcgccgc
cgccgtgttaaggagtggcaggagaagaagcgccgtgagcagcagcaggaggatggtgcc
agtggtggtgcagctgccattgaggctgatggtggaggcaagtctgggaagaagtggacc
ttggatggtgaggagtcggatgaggaggatgtgaagaagttggaggagaatgctggcact
ggtgccatggatgttgacctaccaaacatggataatggcagtaacagcggggctggtttg
gaagaggatgagattgatcccctcgacgcgtttatggactccatggtgttgccagtggtt
gcaaagctcgagagtgccacaacagcgacggagagcgtgcttgctgacaatgcaggtggt
ttgaatgacaagagtgtgaaggatgcgacaagtaatgaggataagaaaagacagatgatg
gcaattggaagaattatgcaaggggatgactctgactcagattatgacgatgctaataat
ggcgaggctggatcagatgatgaggatgatgcagagttcataaaacgtgtcaagaagacg
aaggcagagaagttggttattgttgaccattccaagattgattaccaaccattccggaag
aatttctatattgaggtgaaagacataaaaaatatgccagccgaggaagcggcggcctac
cggaagctgttggagctcaaggtgcacgggaaagacgttccgaagccaataaagacatgg
atccagagtggtctgacaagtaagctacttgacactatcaagaagcttggttttgagaaa
ccgatgcctatacaagcacaggcgttgccagtcataatgagtggacgtgattgtataggg
gttgcaaagactggatctgggaagactctagcatttgtcttgcccatgctgaggcatgtc
aaagatcagccgcctgttgtgcctggggatggccctattgggcttattatggctcctacg
agagagcttgtggtgcaaatatattcagacataaaaaagttctccaaggtgcttggcatc
aactgtgttcctatatacggaggttctggggttgcccagcagatcagtgaactgaagagg
ggtgctgaaattgttgtttgtacaccaggcaggatgattgatatcctttgcactagcagt
ggcaagattactaaccttcgaagagtgactttcttggtgctagatgaagctgataggatg
tttgacatgggttttgagcctcagattactcgaatcgttcagaacacccgtccggatagg
cagactgtccttttctctgccacttttccacggcaggtggagatactggcacgtaaagtg
ctgacaaagcctgttgagattcagatgggtgggaggagtgtcgtgaacaaagacatcaca
caactggtggaagtgcgaccagaaagcgagaggttctttaggctgttggaattgcttggg
gagtggtttgcaaacggaaaaattcttgtttttgtacagtcgcaagataagtgtgattct
ctactgaaagagctgttccagcacggatacccatgtttgtctctacatggtggaaaggat
caaaatgaccgtgaatcaactcttgctgatttcaagagtaatgtatgcagcttgctgatt
gctaccagtgttgctgcaaggggtttagatgtgaaagatcttgagcttgttgtcaattat
gatgtaactaatcattatgaggactatgttcatcgggtcgggcgaacgggtcgcgctggt
aggaagggctgtgctgtgacttttatttctgaggaagaggaacgctatgcaccagacctt
gttaaggctttggagctatctgaacaggccgttccagaggacctgaaagccttagcggat
cgatttatgtcaaaggtcaagcagggaacagagcaggcccatggaacgggctatggtgga
agtggtttcaagttcaatgaagaagaggaggaagcacggaaatctgcaaaaagggctcag
gcaagggaatatggatatgaggaggacaagtcagattcagattctgacgatgaagggggt
gtgcgtaaacagggaggtgatgttgcagcacaagctattgctgctgctcaagctgccgct
gctttggctgctgccagggcaactagtaatgcccagcagcaagtaccagccacaacggct
ggctccttgcttcctctgccggtcgcacctagccaacaaaacaatgaagccacacaacga
gcacttgatgctgcatacaacttacagaaaaatttggcaaggatacaggcccatgcagtt
ccagaacactatgaagcggagcttgagattaatgatttcccacaaaatgctcgctggaag
atcactcacaaagagacattggttcccattcaggaatggactggagcggcaattactaca
aggggaaccttcattcctcaaggcaaaattgttggtgctaacgagcgcaagctgtacctg
tttattgagggccccaatgagtcttccgtcaagaaggccaaagcagaattgaagcgtgtc
cttgaggattgtgccaaccaggcactgaatcttccaggttctgctcaaaccggaaagtat
tctgttctttga
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