Triticum urartu (red wild einkorn wheat): 125522983
Help
Entry
125522983 CDS
T08232
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125522983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tua04121
]
125522983
03036 Chromosome and associated proteins [BR:
tua03036
]
125522983
Enzymes [BR:
tua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125522983
Ubiquitin system [BR:
tua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125522983
Chromosome and associated proteins [BR:
tua03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
125522983
Noncanonical PRC1 (PRC1.1)
125522983
Noncanonical PRC1 (PRC1.3/1.5)
125522983
Noncanonical PRC1 (PRC1.6)
125522983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-UDP
zf-RING_4
zf-RING_10
zf-rbx1
zf-RING_6
zf-Nse
zf-RING_11
ZNF512_C2HC
Motif
Other DBs
NCBI-GeneID:
125522983
NCBI-ProteinID:
XP_048543983
LinkDB
All DBs
Position
1:503848020..503852988
Genome browser
AA seq
498 aa
AA seq
DB search
MPAQKRPHPSPDADDAHVQEEEEAAAAAAAGAAGSGTEGGAPNGGSAELAKDGGGGDSDA
GEDDEDEEQQRRKQQKQEDEHEEGGGSGGDDEDADDSPSSESDAADVDEFILVKLMDIRK
EVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCKSRRSLRDDPNFD
ALILALYPDIDKYEEEELAFGEEEKTRNKKIQDSIAETFRRQTEALVKKRSNAKAIASTR
KTRGSMRTKKRGRTSSPDNAPTDIDDDEREENGNDGSKESSSVDDRSPDVKMKRARRWPV
PRSSPAKNIGSVDSSYEENDDLGGARDILATSPLRGEMLAWGKNGTRSQTRHGSAGGSSG
RMIKGGRVAKLVDHLRNADEFDTKFNLYLALTPLDGQSMPKLEKSYLSCQPTFSVSHLCQ
FVALQLSRQAAEVEIYFRKNSMNGSLKTEDTSADDEAKPELLDGLERLKEDNSLSELYPK
LASGVGDLELLYSVKAQA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgcagaagcgcccgcacccgtcgcccgacgcggacgacgcccacgtccaggag
gaggaggaggctgccgctgccgctgccgccggggccgccggctccggcacggagggcgga
gcgcccaacgggggctccgcggagctggccaaggacggtggcggtggcgattccgatgcg
ggggaggacgacgaggacgaggagcagcagcggcggaagcagcagaagcaggaggatgag
cacgaggagggcggcggcagcggcggggacgacgaggacgccgacgacagcccgtcgtcg
gagagcgacgccgccgacgtggacgagtttatactggtgaaattgatggatatacggaag
gaagtgcagtgccctatatgcttaggcattatccggaaaacaagaacggttatggagtgt
ttgcaccggttttgtagggactgcattgataaatccatgcggcttggaaataatgaatgc
cctgcatgccgcacccactgcaagagcagacgttccttgagggatgatcctaattttgac
gctttaattctagctttatatccagacattgacaagtacgaggaagaggaacttgctttt
ggtgaagaagagaagactcgcaacaaaaagattcaagattccattgctgaaacatttcga
agacaaacagaagcacttgtgaagaagcgctccaatgcaaaagcaatagcttctacaaga
aagacccgtgggagtatgcggacaaagaagagaggacggactagctctcctgataatgcc
ccaactgacattgatgacgacgagagagaagaaaatggcaatgatggcagcaaagaatcg
tcttctgttgatgatcgttcaccagatgtcaagatgaaaagagctcggaggtggcctgtg
ccacgatcatcccctgctaagaatattggcagtgttgatagcagctacgaggagaatgat
gatttgggaggtgccagagatatcttggccacttctccactgcggggagagatgcttgcc
tggggcaaaaatggcacccgcagtcaaactcgacatggcagtgccggtggctccagtgga
aggatgatcaagggtgggcgtgttgccaagttggtggatcatctccgtaatgctgatgaa
tttgatactaagttcaacctgtacctcgctctaactccgcttgatggacaaagcatgcct
aaactggaaaagtcctatctcagctgccagccaacattctctgttagccacctatgccag
tttgttgctcttcagctgtcacggcaagccgcagaggtggagatatacttcaggaagaac
tccatgaacgggtcgcttaaaaccgaagacaccagcgcagacgacgaggcaaaaccggag
ctgctcgacggcctggaaaggctcaaggaggataattcgctttcagagctttaccctaag
cttgcctctggtgttggggacctggagctgctgtactctgtgaaagcacaagcctag
DBGET
integrated database retrieval system
