Triticum urartu (red wild einkorn wheat): 125524273
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Entry
125524273 CDS
T08232
Name
(RefSeq) protein PAT1 homolog 1-like
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125524273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125524273
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125524273
mRNA degradation factors
5'-3' decay
Decapping complex
125524273
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
125524273
NCBI-ProteinID:
XP_048545312
UniProt:
A0A8R7K383
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All DBs
Position
1:complement(513944221..513949600)
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AA seq
817 aa
AA seq
DB search
MRGLRADAGGGGASSSSSASTAESSRFDSGQYSFFGKAPLEGLELGGSLADDGGLDGGYG
GGGFGGHDDGASYQLSPVGEEIDCMSNLSEIDDLASTFAKLNRSISGTRNPGVIGDRRSI
SRESSLTTTDWVQEAEFSNWVDHDILGSDESQDSKQLCPQPQYLPQFGESKPLSRTSSYP
LEPLQHRSSEPILGHRSPSFTSYPPPGGGELSYPAQGLTRHSSIPSPGAGYQMGSPSSSL
TGSPYNMPGLPHGLRLGRSMSYTSADLYANNFLQNEWPSQAGSHAFEHLNLQPSLLQQQL
SFPSSSMSSLLFSQQQQQQQRLSLVQPPHHNYLNMQPHLYHHHSPEIIGRFDHIPSVPSP
RDKRSRSGRGKHSMRFSQQQSDTAGQNVDTGGTKFRSKYMSSEEIDTILRMQHSGSHSSD
PYVDDYYHQACIAKRSVNSQQKVNFSPASIKDSHSKSRSGGDQHSYLKVDSLGRVSFSSI
RRPRPLLEVDIPASGDGHKSSTRPLEKEPMLAARITVEDGICLLLDVNDIDRVLQSSQAQ
DSSFQLRRRRQVLLEGLATSLELVDPFGPNKPGNSSGLAPTDDLIFLRIVSLPKGRKLLA
RYLRLLAPGSELTRIVCMAIFRHLRSLFGGLPSDSGAAETTVSLAKTVSSCVHHMELSAL
SACLAAVVCSSQQPPLRPLGSSAGDGAALIIKSVLDRATELLADPHSAANYSRSTRSLWQ
ASFDAFFGLLTKYCDSKYGSILQRFSMQGSNSMAGPEASKAVSREMPVELLRASLPHTSE
EQRQMLLDFARKSMPVIGYNHSGASGGHSTTSEPVPG
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgaggggcctccgggcggacgccggcggcggcggcgcatcctcctcctcgtcggcctcc
accgcagagagctcgcgcttcgactcggggcagtattccttcttcggcaaggcgccgctg
gaggggctggagctcggcggcagcctggcggatgacgggggcctggacggcggctatggc
ggcggcgggttcggtgggcacgatgacggggcttcttaccagctgtctcctgtgggggaa
gagattgattgcatgagtaacttgtctgaaattgatgatcttgcaagcacgtttgcaaag
ttgaaccgaagtattagcggaacaaggaatcctggtgttattggtgatagacgatcgatt
tccagggaaagttctttgactaccaccgactgggttcaggaagcagagttctcgaattgg
gtagatcatgatatactgggcagcgatgaatcgcaggacagcaaacaattgtgtccgcag
ccacagtatttgcctcagtttggagagtcgaagccattgagccgaacatcatcctatccc
ctggagccactacaacaccgctccagtgaacctattctgggacatagatctccttcattt
acatcctatcctccaccaggtggtggtgaattatcttatcctgcacaaggtcttacgcgg
cactcgagcattccatcaccaggtgctggttaccaaatgggttctccaagttcgtcgctt
actggttctccatataacatgcctggtctacctcatggactgcgattggggcgaagcatg
tcttacacttctgcagatctatacgcgaacaacttcctacaaaatgaatggccaagtcaa
gctggttcgcatgcttttgagcatcttaatctacagcccagtttattgcagcaacaacta
tcttttccgagtagttcaatgtcttcgttgctattttctcagcagcaacagcagcagcag
aggttgtcactagttcagccgcctcatcacaattacctaaacatgcagcctcacttgtat
caccatcattccccagagataataggcaggtttgatcatattcctagtgtgccttcacca
agggacaagagatcaaggtcaggaagaggaaaacacagtatgcgcttttctcaacaacaa
tctgatacagctggccagaatgttgacactggaggaacaaaattcagatcaaagtatatg
tcatctgaagagattgatactattttaagaatgcagcactctggtagtcacagcagtgat
ccttacgtcgatgactactaccaccaagcttgtatagccaaaagatctgtcaactctcag
cagaaggtgaatttctcccccgcatcaataaaagactcccactcaaagtctaggtctggt
ggtgatcagcattcatatctgaaggttgattctcttggaagagtgtcattctcttccata
cgtaggcctcgccctcttcttgaagttgatattcctgcatctggtgatggccacaagtca
tctacgaggccactggagaaagagccaatgctggcagcaagaattaccgttgaggatggt
atatgtcttcttctagatgtaaatgatattgaccgtgtgttacagtctagccaggcacag
gacagcagcttccaactgaggcgaaggcgacaggtcctccttgaaggcttagctacatca
cttgagcttgtcgacccttttggccccaacaaacctggcaattcatctggattggccccg
acggatgaccttatttttctccgtattgtttctctccctaaaggacgcaagctcttggca
cggtatctccgacttcttgcccctggaagtgagctgacccgcatagtctgcatggctatc
tttcggcatcttaggagcttgtttgggggtttgccgtcagattctggtgctgcagaaaca
acagttagtcttgccaagaccgtgtcctcctgcgtgcatcacatggagctcagtgccctc
agcgcctgcctcgcagctgttgtctgctcgtcgcagcagccacctctccgccctcttggc
agctctgctggtgacggtgctgctctaatcatcaaatcagtactggacagagcaactgag
ctactggccgacccccattctgcagccaactacagcaggtcaacccgttctctttggcag
gcgtcgttcgatgccttctttgggcttctgacgaaatactgcgacagcaagtatgggagc
attctgcagaggttcagcatgcagggatccaactcaatggctggacctgaagcctcgaag
gccgtcagcagggagatgcccgtcgagctactacgtgcaagccttccgcacaccagcgaa
gaacaacgccagatgcttcttgactttgctcggaaatctatgcctgtgatcggctacaac
cactccggcgctagcggcgggcattctactacttccgaacctgtccccggttaa
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