Triticum urartu (red wild einkorn wheat): 125524482
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Entry
125524482 CDS
T08232
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03030
DNA replication
tua03410
Base excision repair
tua03420
Nucleotide excision repair
tua03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125524482
03410 Base excision repair
125524482
03420 Nucleotide excision repair
125524482
03430 Mismatch repair
125524482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tua03032
]
125524482
03400 DNA repair and recombination proteins [BR:
tua03400
]
125524482
DNA replication proteins [BR:
tua03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125524482
DNA repair and recombination proteins [BR:
tua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125524482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
AAA_30
RCF1-5-like_lid
AAA_19
RuvB_N
nSTAND3
AAA_assoc_2
AAA_5
PTCB-BRCT
BRCT_2
AAA_16
Sigma54_activ_2
AAA_18
AAA_24
Gp44_lid
AAA_14
AAA_17
AAA_2
Zeta_toxin
NTPase_1
RNA_helicase
Mg_chelatase
RsgA_GTPase
AAA_33
TsaE
Motif
Other DBs
NCBI-GeneID:
125524482
NCBI-ProteinID:
XP_048545488
LinkDB
All DBs
Position
7:550488481..550499565
Genome browser
AA seq
1053 aa
AA seq
DB search
MSSDIRKWFMKPHDKNAGAAKPSAAGAAPPAAKKPVLSIPEKAATSSVSGNQDASARRKT
SKYFAPKTEKDADVAEKSSSKRKLQKSSEDLEDDIKPFAANKALKDEEDDDDDFVAPSKK
KTPVKPPPLKKLKAASNDDDQDERMDEDAEXPSKAAGRGRGRGGRGAGAAHGKTTSHDDG
GGEDRMDEDAKTPSKAAGRGRGRGRGRVGRGGGMAHGKTTSGLDDDGEEDRMDEDDKTPS
KAAARGRGGRGAGATPGGRGRGGGGRGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVI
SGTLDSLEREEAGDLIKRYGGRVTGSISKKTSYLLADEDIGGVKSNKAKDLGVPFLTEDG
LFDMIRKSKLAKAPVNKHEGNSNSEKLLKSQTKSSPVKAERRAVDQVGTMGKSTPSKSNK
ESNSTNNQKVKVVDRGSLQWTEKYRPKVPNDIVGNQSMVKQLHDWLKSWEDQFLHSGQKG
KGKKQADGGAKKAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVG
GSTSNSIKELISNATLNYSDNRTKKPKAVLIMDEVDGMSAGDRGGVADLIASIKISKIPI
VCICNDRYSQKLKSLVNYCLLLNFRKPTKQQMGKRLMEIARKEGIQAQENAMEELAERVH
GDIRMALNHLQYMSLSQSVVKYDDIRLRLNSSSKDEDISPFTAVDKLFGFNGGRLRMDER
IDLSMSDPDLVPLIIQENYINYRPSAAGKDDSGVKRMNYLARAAESIADGDIVNVQIRRY
RQWQLSQAACLASSIVPAALMHGNREVLEAGERNFNRFGGWLGKYSTTNKNKRLLEDVHS
HILASQQANLDREALRLDYLTLLLRQLTDPLKTMPKEEAVQKVVEFMDTYSLSQEDFDTL
VELSKFKGHPNPMDGIQPAVKSALTKAYKQGSSSRVVRSADLINIPGMKKTLKKRVAAIL
EPLDESLPEETGVASAEGDEEELSDAENDDELVPGDSKPKLDLQSDNKKGIQVQLNLKSN
GNGSSAKKAPAARSKAPGSAGKAVGGSGGKRKR
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggacatcaggaaatggttcatgaagccgcacgacaagaatgccggtgcggcc
aagccctctgccgccggcgccgcgccgccggcggccaagaagcccgtgctcagcatcccc
gagaaggctgcgacatcttcggtgtctggcaatcaagatgcttcagctagaaggaagaca
agcaagtactttgcacccaaaacagaaaaagatgcagatgttgctgagaagagttcttct
aaaagaaaacttcagaaaagcagcgaggaccttgaggatgacatcaagcctttcgcagca
aacaaggcccttaaggatgaagaagacgacgacgacgactttgtggcgccttcgaaaaag
aaaactccagtgaagccaccaccattaaagaagttgaaggctgcatctaatgatgatgac
caggacgaaaggatggatgaagatgccgagnacccttccaaagcagctggaaggggaagg
ggaaggggaggaagaggagcaggagcagcccatggaaagactacgagtcatgatgatggt
ggtggggaggacaggatggatgaagatgctaagaccccttccaaagcagctggaagggga
agaggaaggggaaggggaagggttggaagaggaggaggaatggctcatgggaagactact
agtggtcttgatgatgatggtgaggaggataggatggatgaagatgacaagaccccttcc
aaagcagctgcaaggggaagaggaggcagaggagcaggagctactcctgggggaagaggt
agaggagggggtgggagaggtttcatgaattttggtgaaaggaaggatccccctcacaaa
ggggagaaggaagtcccagagggtgcccctgactgtttagctggtctgacatttgtcata
agtggtacccttgacagtcttgaacgggaggaagcaggtgatctaataaagcgttacggg
ggacgtgttaccggttcaattagtaaaaagacgagttacctattggctgatgaagatatt
gggggagtgaaatctaataaagcaaaagatctgggagtcccgttcttgactgaagatggt
ttatttgatatgatccggaaatcaaagcttgcaaaggctcctgtaaacaaacatgaaggt
aacagcaattcagaaaagctactgaagtcacagacgaagagctctccagttaaagctgaa
agaagagctgtcgatcaagtcggtaccatgggcaagagtactccctcaaagagtaataaa
gaaagcaactccaccaacaaccaaaaggtcaaggttgttgaccgcggttctttgcaatgg
acagagaaatatcggccaaaagttccaaacgacatagttggcaaccaatcaatggttaaa
caacttcatgattggttgaaaagttgggaggatcaattccttcattctggccaaaagggc
aaaggaaagaagcaggctgatggtggagctaaaaaagctgtattgctgagtggacctcca
ggtattggtaagactacaactgcaaaagttgttagtcagatgcttggattgcaggccatt
gaggttaatgcaagtgatagccgtggtaaagcagactccaagatcgagaaaggtgttggg
gggagcacatcaaattctatcaaagagcttatcagcaatgctactctgaattatagtgac
aaccggacaaagaagcctaaggctgtactcatcatggacgaagttgacggtatgtctgct
ggtgatagaggtggagttgctgatcttattgccagcatcaagatatcgaagattcctata
gtttgcatttgtaatgatcgttatagccagaagctgaagagccttgtaaattactgtttg
ctactcaacttcaggaaaccaacaaaacagcagatgggcaagaggttgatggagattgcc
agaaaagaaggcattcaagctcaagagaatgcaatggaagagcttgcagaaagagtacat
ggggatattcgcatggcactcaaccatttgcaatatatgagtctctctcagtctgtggtc
aaatatgatgatataaggttgcgtcttaatagtagctcaaaagatgaagatatctctccc
ttcacggctgtggacaagctatttggtttcaatggtgggagactaaggatggatgagaga
atcgacttgagcatgagcgatcctgatttagttccccttattatccaggaaaattatatc
aattatcggcctagtgccgctgggaaggatgacagtggtgttaaaagaatgaattatctt
gcccgtgccgctgagtctatagcggacggtgatattgttaatgtgcaaataagaagatat
cgacagtggcagctgtcccaagctgcttgtttggcttcatcaatagtacctgctgctttg
atgcatggaaatagagaagtccttgaagcaggtgaacgaaactttaataggtttggtgga
tggttgggcaagtactcaactactaacaaaaacaaaaggctactggaagatgtccatagt
catattcttgcatcacagcaagctaatttggatagggaggcgttgaggctcgattatctc
actcttctcttgagacagttgactgacccactgaagacaatgcctaaggaggaggctgtc
caaaaggtggtggagtttatggatacctactctttaagccaggaagactttgacacgctt
gttgaattatctaaatttaagggccatccaaatcctatggatggtattcaaccagctgtc
aaaagtgccttgacgaaggcatacaaacaaggaagtagctctcgtgttgttcgatcagca
gatctaataaatattccgggcatgaaaaaaactttaaagaaacgagtggcagcaatcctg
gagccattggatgagagtttgcctgaagaaactggagtagcatctgcagaaggtgatgaa
gaggaattgtctgatgctgaaaatgatgatgaacttgtgcctggtgactcgaagccaaaa
ctggacctgcagagtgataataagaaaggaattcaagtgcagctcaacctgaagagcaat
ggcaacgggtcgagcgcaaagaaggcgccagcagcaagatcaaaagctcctgggtctgca
gggaaggctgtcggaggctcaggcgggaagcggaagaggtag
DBGET
integrated database retrieval system
