Triticum urartu (red wild einkorn wheat): 125525405
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Entry
125525405 CDS
T08232
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9-like isoform X1
KO
K18735
protein SMG9
Organism
tua
Triticum urartu (red wild einkorn wheat)
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125525405
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
125525405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NB-ARC
MMR_HSR1
RsgA_GTPase
AAA_18
nSTAND3
MeaB
ABC_tran
AAA_16
DO-GTPase2
AAA_28
Spore_III_AA
Motif
Other DBs
NCBI-GeneID:
125525405
NCBI-ProteinID:
XP_048546363
LinkDB
All DBs
Position
7:20377882..20398619
Genome browser
AA seq
413 aa
AA seq
DB search
MAAGQPQLLAGVGDRGSSSSSSSHPPPPPPPKILLAKPPLPPPSSSGADDEGAGGGGGAR
ARQGPQPGSLSLVSDAWEVHTDKILPYLTENNDFMVIGIIGPPGVGKSTIMNELYGYDGS
SPGMHPPFATQTEEIKAMAKHCTAGVDFRISHERVILLDTQPVYSPSILMDMMRPDGSSS
LPVLNGDPLPADLAHELMGIQLGVFLASVCNIVLVVSEGINDFSMWELMLTVDLLKNNIP
DPSLLTSSTPDKENKNDNQSGSEDYMADLCFVHARLRDHDFSPSKLRLLRETLEKHFESS
SFNIGSSSATPEVTDSSVAPSTKVEELSSSQQDVFLLPLRSHDNSAKFEYGTYSSMLGKL
RDQVLARPLRPFAKNLTERDWLRSSAKIWDMVKRSPVASDYCKALQSSGLFRK
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggccgccggacagccgcagctgctcgccggcgtcggcgaccggggctcctcatcctcc
tcctcctcccacccgccgccaccgcctccgcccaagatcctcctcgcgaagccgcctctg
ccgcccccctcgtcctccggcgccgacgacgagggcgctggcggcggcggcggcgcccgc
gcgcggcaggggccgcagcctggctcgctcagcctcgtctccgacgcctgggaggtccac
accgacaagatcctgccgtatttgacagagaacaacgatttcatggtgatcgggataatc
ggcccacctggtgtgggcaagtcaaccatcatgaacgagctttatggatatgatggaagc
tcacctggaatgcatcctccttttgctacacaaacggaggaaatcaaagcgatggcaaag
cactgtactgcaggtgttgatttcaggatatctcatgaacgagttatacttctcgacacc
cagccagtatacagtccatccatcctaatggatatgatgaggccagatggttcatcttca
cttcctgttcttaacggcgatccattaccagcagacctggcccatgagctaatgggaatc
cagcttggtgttttcttggcatctgtctgtaatattgtgttggttgtgtcagaagggatc
aatgatttttccatgtgggagctcatgcttacggttgatttgttgaagaataacatacct
gacccatcattgttaacatcatctacaccagacaaggaaaataagaatgataaccaatca
ggcagtgaagattacatggccgatctctgttttgtgcatgctagattgagggaccatgac
ttttctccttcaaagctcaggcttctacgggagactcttgaaaaacacttcgagtcctct
tcatttaacattggcagctctagtgcgacacctgaagttaccgattcctcggttgctcca
agcacgaaagttgaagagttgagctccagccagcaggacgtgttccttcttccattaaga
tcacatgataactcagcaaagtttgagtatgggacatactcatccatgctaggaaagctt
cgtgatcaggtcctggcgaggccgttgaggccgttcgcgaagaacctcacagagcgtgac
tggctgaggagctcggccaagatatgggacatggtgaagagatctcccgtcgcctcggac
tactgcaaggcgctccagagctcgggattgttcaggaagtag
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