Triticum urartu (red wild einkorn wheat): 125526048
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Entry
125526048 CDS
T08232
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125526048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tua03041
]
125526048
Spliceosome [BR:
tua03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
125526048
Complex C
U4/U6.U5 tri-SnRNP related factors
125526048
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Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
125526048
NCBI-ProteinID:
XP_048547029
UniProt:
A0A8R7V0H3
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Position
7:complement(48216687..48220553)
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AA seq
394 aa
AA seq
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MELQTSGRPIEVLMEKVLSMNIVSSDYFKELYKIKTYHEVIDEIYNQVDHVEPWMTGNCR
GPSTAFCLLYKLFTMKLTVNQMHGLLKHPDSPYIRAIGFLYLRYAADPKTLWTWYEPYIQ
DDEEFSPGSNGKMTTMGVYVRDVILGQYYFDSLLPRVPLLILRQVTAHLEKMKLPTKQSG
ITGDSSRLGSDDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRKTLPSVRERERSHDG
GHAKSPPRKHRSQSRERSRDIERDRSDRDRGRYKDREHGRHSRDNRDRDYRRSSYSDRDV
ERRGHERRDRDSDRNGRSSGRRSRSRSRSPSRGRTNGDSHRSSPFGKAPEPSNLAKLKDL
YGDATNAKDDAGDDRARRDSGTEEVIRLGGARWR
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcagacgtcgggccggcccatcgaggtgctcatggagaaggtgctgtcgatg
aacatcgtctcctcggactacttcaaggagctctacaagatcaagacttaccacgaggtc
atcgacgagatctacaaccaggtggaccacgtcgagccctggatgacgggcaactgccgc
ggcccctccaccgccttctgcctcctctacaagctcttcaccatgaagctcaccgtcaac
cagatgcacggcctgctcaagcacccggactccccctacatcagagctattgggttcctg
tacctgcgctatgctgcggacccaaagaccttatggacctggtatgagccctacattcaa
gatgatgaggagttttcccctggatccaatggtaaaatgacaactatgggcgtttatgtg
cgtgatgttatccttggtcagtactacttcgacagtcttcttccacgagtgcctctccta
attctgcgacaggttactgcccatcttgagaaaatgaagctcccaacaaagcagtcaggg
ataactggggattctagccgccttggttcagatgatactgcccggcggcctccttcagtg
aaggcttctctgtcggtctcttttggtcagcgtgctccacaccgtgcatccacaagggat
tcatccccagtccgaaagacattgccatctgtacgagaaagggaaaggagtcatgatggc
ggtcatgccaaatctccacccaggaagcaccgaagtcagagtcgtgagcgcagccgtgac
attgagagggaccgttcagatcgcgatcgtggtaggtacaaggatagggagcatggtcgg
cacagccgtgataacagagaccgtgactaccgccgctcgagctattctgatagggatgtc
gagaggcggggccatgaaaggagggatagggactctgacagaaatgggcgttcgagtggc
cgcagaagcaggagcaggagcaggagtccaagccgtggcagaaccaacggggacagccat
cgctccagtccgtttggtaaagcgccggagccatccaacctggcgaagctgaaggatctg
tacggtgacgccacaaacgcaaaggacgacgccggcgatgatagagcccgcagggattcc
ggaactgaagaggtgatcagattgggaggcgccaggtggaggtga
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