Triticum urartu (red wild einkorn wheat): 125527161
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Entry
125527161 CDS
T08232
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125527161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tua03041
]
125527161
03009 Ribosome biogenesis [BR:
tua03009
]
125527161
Enzymes [BR:
tua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125527161
Spliceosome [BR:
tua03041
]
Complex A
U1 snRNP components
U1 related factors
125527161
Complex B
125527161
Ribosome biogenesis [BR:
tua03009
]
Eukaryotic type
Pre-60S particles
Helicases
125527161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
QCR10
Motif
Other DBs
NCBI-GeneID:
125527161
NCBI-ProteinID:
XP_048547680
UniProt:
A0A8R7VJX3
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MSRFDGRAADPSSYRDRRSEGAFGGGTRAFAPSGKPDAAAAAAAAELDGLPRFEKNFYVE
VPAVAGMTAEEVEAYRRRREITVEGNDVPKPVRDFRDVGFPDYVLQEITKAGFTEPTPIQ
SQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAV
QIQQETTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIIIATPGRLIDMIESHHTNLRR
VTYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVELLARTFLFDPYKVI
IGSEELKANHAISQHVEILSESQKYNKLVNLLEDIMDGSRILIFMDTKKGCDQITRQLRM
DGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLE
DYVHRIGRTGRAGATGTAYSFFTAANARFAKDLISILVEAGQKVSPELANMGRGAPPPSL
GHRDRYRGHGGGRSWS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcttcgacggccgtgcggcggaccccagctcctaccgcgaccgccgcagtgag
ggggcgttcggtggcgggacgagggcgttcgcgccgtcaggaaagccggatgctgccgcc
gcggcggccgcggcggagctggacgggctgccgcggttcgagaagaacttctacgtggag
gttcccgcggtggccggcatgacggcggaggaggtcgaggcctaccgccgccgccgggag
atcaccgtcgagggcaacgacgtgcccaagccggtgcgcgacttccgcgacgtcggcttc
ccagactacgtgttgcaagaaatcacaaaagctggctttacagaacctacccctatccag
tcacaaggttggccaatggcactgaaggggcgtgatcttattggcattgctgaaacagga
tctggaaaaacacttgcttaccttttacctgccattgttcatgttaatgctcagcctatt
ctagctcctggtgatggtccgattgttcttgtgttagcccctacacgtgaacttgctgtc
cagatacagcaggagacaacaaaatttggtgcatcatcaaagataaaaagcacatgcata
tatggtggtgtcccaaaaggtcctcaagttcgtgatcttcaaaaaggtgttgaaattatt
atagccacgccaggaagactaattgatatgatcgaatcacatcacacaaatttgcggagg
gtcacataccttgttttagacgaggcagatcgaatgctagacatgggttttgaacctcag
attaagaaaattgtgtctcagattcgtccagatcgacaaactctttactggagtgctacc
tggccaaaggaagttgagctgctagcaaggactttcctttttgatccatacaaggttata
attggttctgaagaactgaaagctaatcatgctatttctcagcatgtagagatattatct
gagagtcagaagtataacaagttggtcaatctactggaggatataatggatggcagccga
attttaatattcatggacaccaagaaaggatgcgatcagatcaccagacagcttcgaatg
gatggttggcctgctctgtctatccatggtgacaagagccaagctgaaagagattgggtt
ctttctgaattcaagtcggggaaaagccctattatgacagctactgacgttgctgctcga
ggcttagatgttaaggatgtcaagtatgtcattaactatgactttccggggtctctggag
gattatgtccatcgcattggtcgaactggcagagctggagcaacagggacagcctacagc
tttttcacggctgctaacgccagatttgccaaggatcttattagcattttagttgaagct
gggcaaaaggtcagccctgaattagctaatatgggccgtggtgcaccacctccttctttg
ggtcatcgtgatagatacagggggcatggaggtggtcgttcatggagctga
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integrated database retrieval system
