KEGG   Triticum urartu (red wild einkorn wheat): 125527450
Entry
125527450         CDS       T08232                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
  KO
K14962  COMPASS component SWD2
Organism
tua  Triticum urartu (red wild einkorn wheat)
Pathway
tua03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tua00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    125527450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tua03019]
    125527450
   03036 Chromosome and associated proteins [BR:tua03036]
    125527450
Messenger RNA biogenesis [BR:tua03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     125527450
Chromosome and associated proteins [BR:tua03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     125527450
    COMPASS/SET1 complex (yeast)
     125527450
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I WDR55 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 PQQ_3 eIF2A WD40_MABP1-WDR62_1st Beta-prop_NWD2_C WD40_RFWD3 WD_LRWD1 Beta-prop_RIG_1st Beta-prop_IFT122_2nd AC_1
Other DBs
NCBI-GeneID: 125527450
NCBI-ProteinID: XP_048547915
UniProt: A0A8R7K414
LinkDB
Position
1:complement(538610392..538618234)
AA seq 320 aa
MAATLSQLDDGIVRSMAIGAVFTDYAGKISCLDFHRKEDLLVTSSEDDSIRLYNTTSATL
SKTTYHKKHGADRVCFTHHPSSILCSSRYNVESGESLRYLSLYDNRCLRYFKGHKDRVVS
LCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPSVAYDQQGLVFAVAMEGGAIK
LFDSRSYDKGPFDTFLVGGDTAEVSDIKFSNDGKSVLLTTTNNHIYVLDAYGGEKKCGFS
LEPSRNIATEAAFTPDGQYVISGSGDGTLHAWNINTVQEIACWNSHIGPITALKWAPRRA
MFATASTALTFWIPNESSSS
NT seq 963 nt   +upstreamnt  +downstreamnt
atggcggccacgctgtcgcagctggacgacggcatcgtccgcagcatggccatcggcgcg
gtcttcaccgactacgccgggaagataagctgcctcgacttccaccgcaaggaggacctc
ctcgtcacctccagcgaggacgactccattcgcctctacaacaccaccagcgccacgttg
tcgaagacaacttatcataaaaaacatggtgctgaccgtgtctgttttactcatcatccg
agttccatattatgttcatcaagatacaatgtggagtcaggagaatcacttcgttacctg
tcattgtatgacaaccgttgcttgagatatttcaaaggacacaaagacagggttgtttca
ctatgtatgtcacctgtcaatgatagctttatgtcggggtcacttgatcacagtgtcaga
atatgggatcttcgtgtaaatgcttgtcagggtatactacgtctgcgtggtaggccttct
gttgcatatgatcagcagggacttgtttttgctgtagcaatggagggaggtgctattaag
ctgttcgattctcggtcatatgacaagggtccatttgacactttcttggttggtggagat
acggctgaagtgtctgacattaaattcagcaatgatggcaagtctgtgcttttgactaca
actaacaaccatatatatgttctggatgcatatggaggggagaagaagtgtggcttcagc
ttggagccatctcgcaacattgcaactgaagctgctttcactccagatggtcaatatgta
atttcaggatctggtgatggtaccttgcatgcttggaacatcaatacagtacaggagatt
gcctgttggaacagtcatattggtcctatcactgctttgaaatgggcccctcgtcgagct
atgttcgcaactgcatcaaccgcactaactttctggattcccaacgaatccagttcgagt
tag

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