Triticum urartu (red wild einkorn wheat): 125527776
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Entry
125527776 CDS
T08232
Name
(RefSeq) zinc finger CCCH domain-containing protein 45
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125527776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tua03021
]
125527776
03019 Messenger RNA biogenesis [BR:
tua03019
]
125527776
Transcription machinery [BR:
tua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125527776
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
125527776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
zf_CCCH_4
zf-CCCH
zf-CCCH_2
Torus
zf-CCCH_4
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
125527776
NCBI-ProteinID:
XP_048548247
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MDDGDGGLSFDFEGGLDTGPAAGGLALSSADAGATGGGGGGDGGGHGRGRGRGSYRQTVC
RHWLRGLCMKGEACGFLHQFDKARMPVCRFFRDYGECREPDCAYKHSYDDVKECNMYKMG
FCPNGPNCRYKHVKLPGPPPPVEEVLAKILQMRSSNFNKFNQHRNNNYNQQGDRPRPPPG
SGLPNQNSTDNASTMQPAAGQQAQTMNQQPQQKQQQVQQQQKPNTNDQVQGVPNGSSNQP
TRLATPLPQGSSRYFIVKSCNRENLEISVQQGIWATQRSNEAKLNEAFESMDNVILIFSI
NRTRNFQGCAKMTSRIGGYIGGGNWKSANGTAHYGRNFSLQWLKLCELSFQKTHHLRNPY
NDNLPVKISRDCQELEPFIGEQLASLLYLEPDSELTAMLVAAEAKREEEKAKGVSADEAA
DNQDIVLFEDNEEEEEEESEEEDENNGQESQGRGRGRGMMWPPQMQMPRGPMMGPRGFPP
NMMGDFGGGFGFGMPDPFGMPRGFPPFGGPRFPGDFPRGPMPGMVFPGRPPQPGGMFPMG
LEMMMGPGRGPLMGMGGPGRPNRPIGMAPFMPPPPPRPVKRDQRRPGGDNRGDRYETGSD
QGSRGHDNNAGNSGADGNRSQSGDRFGRSAFRDDDSESDEEAAPRRSRKR
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggacgacggcgacggcggcctcagcttcgatttcgagggcggcctcgacacgggccca
gcggcgggcgggctagcgctgtcctcggccgacgccggcgcgaccggcggcggcggcggc
ggagatgggggcgggcacgggcgaggccgcgggcgcggcagctacaggcagacggtgtgc
cggcactggctgcgcgggctgtgcatgaagggcgaggcgtgcgggttcctccaccagttc
gacaaggcccgcatgcccgtgtgccgcttcttccgcgactacggcgagtgccgcgagccg
gattgcgcctacaagcactcctacgacgacgtcaaggagtgcaacatgtataagatggga
ttttgccctaatggcccaaattgccgatacaagcatgtcaagttacctggaccaccacct
cctgtcgaggaagttctcgcgaagattttgcagatgcggtcttccaatttcaacaagttt
aatcagcacaggaacaataattataatcagcagggggacaggcctcgacctccacctggt
tcaggcttacctaaccaaaattcgacagacaatgcttcaacaatgcaaccagctgctggg
caacaagctcaaacaatgaatcaacagccccaacagaagcagcagcaggtgcagcagcag
cagaagccaaatacaaacgaccaggttcaaggtgttccaaatggctcctctaatcaaccc
accagacttgcaacacccctcccgcaagggtcgtctaggtacttcattgttaagagttgc
aatcgggagaacctggaaatatcagttcagcagggaatctgggctactcaaaggagtaat
gaggctaaactaaatgaagcttttgaatccatggacaatgttattttaatattctcaatc
aatagaacacgtaatttccagggttgtgcaaagatgacttctaggattggtggctacatt
ggtggcggaaactggaaatctgctaacggaacagcacattatggtcggaacttctcacta
cagtggcttaagctttgcgaattgtcgtttcagaaaactcatcatcttcgcaacccatac
aatgacaatctccctgtcaagatcagtcgagattgccaggaattagaacctttcattggt
gagcaattggcttctctgctttatctggagccagatagtgaacttacggctatgctagtt
gcagcagaggccaagagagaagaggaaaaggcgaagggagtcagtgccgacgaagcagct
gacaaccaagatattgtgctgtttgaggacaatgaagaagaggaggaagaggaaagtgag
gaggaagacgaaaacaatggccaagaatcccagggaagggggcggggaaggggaatgatg
tggccgcctcagatgcagatgccacgtggaccaatgatgggaccgcgcggcttccctccc
aacatgatgggcgattttggtggtggtttcggctttggcatgcccgatccgttcggcatg
ccgcgtggcttcccaccattcggtggcccaaggttccccggtgacttccccagaggtccc
atgcctggcatggtcttccccggaaggcctccgcagcccggcggcatgttccccatgggc
ctcgagatgatgatgggtcccggccgagggccgctcatgggaatgggcgggccaggacgg
ccgaaccgccccatcggcatggcccccttcatgccgccgccgccaccccgtcccgtgaaa
cgggaccagaggaggccgggcggcgacaacaggggtgacaggtacgagacagggtctgac
caggggagcaggggccatgacaacaatgctggcaactccggagcagacgggaacaggtcc
cagtctggggacaggtttggcaggagcgccttccgggacgacgacagcgagagcgacgag
gaggcggcacccaggcggtcaaggaagcgatag
DBGET
integrated database retrieval system
