Triticum urartu (red wild einkorn wheat): 125528067
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Entry
125528067 CDS
T08232
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03040
Spliceosome
tua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125528067
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125528067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tua03041
]
125528067
04121 Ubiquitin system [BR:
tua04121
]
125528067
03400 DNA repair and recombination proteins [BR:
tua03400
]
125528067
Enzymes [BR:
tua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125528067
Spliceosome [BR:
tua03041
]
Complex B
Other components
Prp19 complex
125528067
Complex C
Prp19-CDC5 complex
125528067
Ubiquitin system [BR:
tua04121
]
Ubiquitin ligases (E3)
U-box type E3
125528067
DNA repair and recombination proteins [BR:
tua03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
125528067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_HPS5
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_DCAF4
eIF2A
U-box
zf-Nse
PEP5_VPS11_N
PAN2_N
KNTC1_N
PAS_11
Beta-prop_NWD2_C
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
125528067
NCBI-ProteinID:
XP_048548540
UniProt:
A0A8R7VDR3
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
DB search
MICAISGEVPDEPVVSKRSGLLFERRLIERYIEDHGKCPVTKEELSMDDIVLVKTNKVVR
PRPLQAASIPGLLGIFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
ERDESRALLALAERQIPASMAGVAPAAVVSNGKRAMEDEIGPDGKKIRPGINPVMIDELT
ECNTMLSAQRKKRQVPPSLASIDELERYTQISSHPLHKTNKPGILSMDIHPSKDIVATGG
IDTNAVLFDRTSGQILCTLAGHSKKITTLKFVPRDELVVTGSADKTVRIWQGGEEGNYSC
IHTLKDHTAEVEAVTVHATQKYFVTAAKDNTWCFYDISTGSCLSQVGEASGQEGYTSASF
HPDGLILGTGTTEAVVKIWDVKTQSNVAKFEGHAGPVTAMSFSENGYFLATAALDGVKLW
DLRKLRNFRTFSPYDSDTPTNSVEFDFSGTYLAVAGSDIRVYQVANVKTEWNLIKTLPDL
SGTGKVTSAKFGTDSKYIAVGSMDRNLRIFGLPGDDQMDDDAKPSAE
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgatctgtgcaatctccggcgaggtgccggatgagccggtggtatcaaagaggtcgggg
ctcctctttgagcggcggctcatcgagcgctacattgaggaccatggaaagtgtccagtt
acgaaggaggaactctccatggacgacatcgtgctggtgaagaccaacaaggtcgtgagg
cccaggcctctgcaggctgcaagcattcccggactccttggaatctttcaaaacgagtgg
gatgctcttatgctttctaattttgctttggagcagcagcttcacacagcaagacaagaa
cttagtcatgcgttataccagcatgatgctgcctgccgtgttatagccagattaaagaag
gaaagagatgagtctagagcacttttggctctagctgagagacagattccagcgtcgatg
gcgggagttgcacctgcagctgtcgtctccaatggaaaaagagcaatggaggatgaaatt
ggccctgatgggaagaagatacgccctggtatcaatcctgtcatgatcgatgaactaaca
gagtgtaataccatgctttctgcccagcgtaagaaacgacaggtaccaccaagtttggca
tcaattgatgaactggagagatatactcagatctctagccatccactccacaagacaaac
aagccgggcattttgtctatggatatccatccgtcaaaggacatagttgcaactgggggt
attgatacgaatgcagtgctatttgataggacatctggtcaaatcctttgtacacttgct
ggtcactccaagaagataaccactttgaaatttgttccacgggatgagcttgtggtaact
ggatcagcagataagactgttcggatttggcaagggggtgaggagggaaactacagttgc
atccatactttgaaagatcataccgccgaggtcgaagctgttactgtgcatgcgactcag
aagtactttgtgaccgcggccaaggataatacttggtgcttctatgatatttcaactggg
tcttgcctctcacaggttggcgaggcttcaggacaagagggatatacatctgcgtctttc
cacccagatggtcttatccttggaacaggaactactgaagctgttgtcaaaatttgggac
gtgaaaactcagtccaatgttgcaaagtttgaggggcatgctggacctgtcactgctatg
tccttctctgaaaatggttacttcctggcgactgctgctcttgatggtgtcaagctttgg
gatctaaggaaattgagaaattttaggactttctcgccatatgattcggatacgccgaca
aattctgtggaatttgattttagcggtacctatcttgctgttgctggttcagatataagg
gtttaccaagtagccaatgtcaagacggaatggaatcttatcaagaccttgccagatttg
tcaggaacagggaaagtgacctctgcaaagtttggcactgattccaaatatatcgccgtc
ggctctatggaccgtaacctgaggatatttgggcttcctggagatgatcaaatggatgat
gatgcaaaaccatcggcagagtga
DBGET
integrated database retrieval system
