Triticum urartu (red wild einkorn wheat): 125528236
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Entry
125528236 CDS
T08232
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125528236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125528236
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125528236
mRNA degradation factors
5'-3' decay
Lsm complex
125528236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
125528236
NCBI-ProteinID:
XP_048548689
LinkDB
All DBs
Position
Unknown
AA seq
128 aa
AA seq
DB search
MSWAGPDEILLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEL
YCDVPLGLYVIRGENVVLIGELDREKDELPSHMTCVSEAEIRTAEKAEKEARDLKGTMRK
RMEFLDFD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggccgggcccgacgagatcctcctctccacctccctggccggcttcttagat
aaaaaacttattgtcctactacgagatggacgaaagctgcttggcactctctgctcattc
gatcagtttgcaaatgttgttcttcagggtgcttgtgaacgagtaattgtgggcgaatta
tattgtgatgttcctcttggtttatatgtgatccgcggagagaatgttgtattaattgga
gaactggatcgcgagaaggacgaactccctagtcacatgacttgtgtttcagaggctgaa
ataagaacggccgagaaagccgaaaaggaagcaagggatctgaaaggcacaatgaggaag
aggatggagttcctagacttcgattag
DBGET
integrated database retrieval system
