Triticum urartu (red wild einkorn wheat): 125528416
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Entry
125528416 CDS
T08232
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua04120
Ubiquitin mediated proteolysis
tua04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125528416
04120 Ubiquitin mediated proteolysis
125528416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tua04121
]
125528416
Enzymes [BR:
tua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125528416
Ubiquitin system [BR:
tua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125528416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
FlxA
zf-RING_11
zf-RING_16
zf-RING_5
zf-RING_Vps41
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
125528416
NCBI-ProteinID:
XP_048548854
UniProt:
A0A8R7VB45
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MIRLQTYAVFSLLATITSVYYAFSSREQFYPAMVYLSTSKICFVLLLNTGLVAMCVAWQL
VKRVFLGTLREAEVERLNEQSWREVVEILFAVTIFRQDFSVSFLAMVAALLLVKALHWLA
QKRVEYIETTPSVPMLSHIRIVSFMLFLLVVDCLFLANSLGSLIQKREASVAIFFSFEYM
ILATSTVSTFVKYVFYVSDMLAEGQWENKAVYTFYLELISDLVHLSLYMLFFIAIFLNYG
VPLHLIRELYETFRNFRIRISDYIRYRKVTSNMNERFPDATPDELDAGDVTCIICREEMT
TAKKLLCGHLFHVHCLRSWLQRQHTCPTCRAPIIPPDNGRAASAQQHGAQPGVQPGTGTP
SSGGAPTENVNMRQAKLEAAASAASLYGRSFAYPPVNTLNRNSGPLHATPSTSQPGEAST
STSHPLEPQPSYSRGPVSSTTGSGDPGNSLQKAYEKAIRSQIEVLQIQLQMMQQGATASP
TSNENAEQAGK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgatccggttgcagacgtacgcggtgttcagcctgctggcgacgataacgtcggtgtac
tatgcgttcagcagcagggagcagttctacccggccatggtctacctctccacgtccaag
atatgcttcgtgctgctcctcaacacgggcctcgtcgccatgtgcgtcgcctggcagctc
gtgaagcgcgtcttcctggggacgctccgggaggccgaggtcgagcggctcaacgagcag
tcgtggcgtgaggtcgtggagatcctcttcgcggtcaccatcttccgccaggatttctcc
gtctctttcctcgccatggtcgccgccctgctcctcgtcaaggctctgcactggcttgcg
cagaagagggtcgagtacattgagaccacaccctccgtgccaatgctgtcgcacataagg
atcgtgtccttcatgctattccttcttgtcgtcgactgcctcttcctggcgaactcgctg
ggctcactgatacagaagcgggaggcatctgtggccatcttcttttcttttgagtatatg
atactggcaacatcgacagtgtcgacattcgtgaagtatgtattctatgtcagcgacatg
ctagcggaaggtcaatgggagaataaagcagtgtatacattttatttggagcttatcagt
gaccttgtgcacttgtctttatatatgctattcttcatagcgatcttcctgaactatggt
gtcccattgcacttgattcgtgagctgtatgagaccttccgcaacttcagaattcgcatt
tcagattatatacgctacagaaaggtgacttccaacatgaatgaacgctttccagatgcc
acaccagatgagcttgatgcgggtgatgtcacatgtattatttgccgtgaagagatgacc
acagcaaagaagctgctttgtgggcacttgttccatgtacattgtttgaggtcatggcta
cagcgccaacatacttgcccaacatgtagagctccaattatccccccagataatggacgt
gcagcatcagcacagcagcatggagctcaacctggagttcagcctggcaccggtactcca
agttcaggaggagcaccaactgagaacgtgaacatgcgtcaagcaaaacttgaggctgct
gcttcagctgcttctttatatgggagatcatttgcttatcctccagtgaacactttgaat
aggaactcaggacctctgcacgctacaccaagtacttcacaaccaggagaagcaagtact
tccaccagccatccattagaacctcagccttcttattcacgtggtccagttagttcaaca
actggtagcggggaccctggaaattcactacagaaggcatatgaaaaggctataaggagc
cagatagaggtgttgcaaatccaattgcaaatgatgcagcaaggggccaccgcatcgcca
actagcaatgagaacgctgagcaagccggaaaataa
DBGET
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