Triticum urartu (red wild einkorn wheat): 125528793
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Entry
125528793 CDS
T08232
Name
(RefSeq) eukaryotic initiation factor 4A-III homolog B
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03013
Nucleocytoplasmic transport
tua03015
mRNA surveillance pathway
tua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125528793
09122 Translation
03013 Nucleocytoplasmic transport
125528793
03015 mRNA surveillance pathway
125528793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125528793
03041 Spliceosome [BR:
tua03041
]
125528793
03009 Ribosome biogenesis [BR:
tua03009
]
125528793
03012 Translation factors [BR:
tua03012
]
125528793
Enzymes [BR:
tua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125528793
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125528793
mRNA cycle factors
Stress granule specific factors
125528793
Spliceosome [BR:
tua03041
]
Complex C
Other components
EJC/TREX
125528793
Ribosome biogenesis [BR:
tua03009
]
Eukaryotic type
90S particles
Helicases
125528793
Translation factors [BR:
tua03012
]
Eukaryotic type
Initiation factors
eIF-4
125528793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
Cas3-like_C_2
AAA
Helicase_RecD
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
125528793
NCBI-ProteinID:
XP_048549187
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MAAAAGGATTSTRRGPGGGGRPMDDENLTFETSAGVEVVGSFDAMGIREDLLRGIYGYGF
EKPSAIQQRAVIPIITGRDVIAQAQSGTGKTSMISLSVCQVIETNVHEVQALILSPTREL
ATQTERVMQAVGNFMSVSVHACVGGKSIGEDIRKLESGVHVVSGTPGRVCDMIKRRTLRT
RAIKLLVLDEADEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHDILEITSKFMTDPVR
ILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMR
TNNFTVSAMHGDMPQKERDAIMSEFRGGMTRVLITTDVWARGLDVQQVSLVINYDLPNNR
ELYIHRIGRSGRFGRKGVAINFVRKDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcgggcggcgcgacgacgtcgacgaggcgcgggccgggcggcggcggc
cggccgatggacgacgagaacctgaccttcgagacctcggcgggggtggaggtggtcggc
agcttcgacgccatggggatccgcgaggacctgctccgcggcatctacggctacggcttc
gagaagccctccgccatccagcagcgggccgtcatccccatcatcaccggccgcgacgtc
atcgcgcaggcccagtccggcaccggcaagacctccatgatctccctctccgtctgccag
gtcatcgagaccaacgtccacgaggtgcaggcgctgatactgtcgccaactagggaactt
gcgacgcaaacagagagggtgatgcaggctgttggtaacttcatgagcgtctctgtgcat
gcctgtgttggtggcaaaagtatcggcgaggatattaggaagctcgagtctggagtgcat
gttgtttcaggcaccccgggcagagtatgtgacatgatcaagagaaggacccttcgcaca
agagccatcaagctcctagtcctggacgaagccgatgagatgttgagcagaggtttcaag
gatcagatatatgatgtctacagatatcttcccccagaacttcaggttgttttgatctct
gcaactctgccccatgacatcttggagataactagcaagttcatgactgatccagtcagg
atccttgtaaaacgtgatgagttgaccctagagggcatcaaacaattctttgttgctgtt
gagaaagaggaatggaagtttgatacactgtgcgatctttatgatacacttacaatcacc
caagctgtcattttctgcaacactaagagaaaggtggattggcttactgaaaggatgcgc
accaacaacttcacggtgtcagctatgcacggtgacatgcctcagaaggaaagggatgcg
atcatgagtgagttcaggggaggcatgacccgtgttctgatcacgaccgatgtttgggct
cgagggctggatgtccagcaggtctctcttgtcattaattacgatctcccaaacaaccgt
gagctttacatccatcgtattggtcgctctgggcgtttcgggcgcaagggtgtggcgatc
aactttgtgcgcaaggacgacatccgtatccttcgggacatcgagcagtactacagcacg
cagatcgacgagatgcccatgaacgtcgctgatcttatctga
DBGET
integrated database retrieval system
