Triticum urartu (red wild einkorn wheat): 125529026
Help
Entry
125529026 CDS
T08232
Name
(RefSeq) probable NOT transcription complex subunit VIP2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125529026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125529026
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125529026
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125529026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
125529026
NCBI-ProteinID:
XP_048549392
UniProt:
A0A8R7VBY8
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MSSLLNSNLNSSASNLPDSTGRPFATSFSGQSGSVQGLHHSGLRNIHGNFSLPSMPGSLA
QRNAVMSGLPSSGVQQPGGSISGRFASNNLPVAMSQIPHAHSGVSGRGMNVGGGQAFSSG
MNMGGTIQGLYSNLGTSGNRNSVPGMSVSPALGNLGPRITSSAGNIVGGSNIGRSISSGG
LSVPSISSRIDFSSNAGSGRLNVQGSNRIMNGLNPQGSSQLINMIGNSYPTSGGSLSQNQ
MQPGNNSLGSMGMLHDASDSTPFDINDFPQLTGRPNSAGGPQGQYGSLRKQGVGVNSIVQ
QNQEFSIQNEDFPALPGFKGSSSDYAMELNHTEQLHENVPVMQGQQYPMARSVGFNLGNS
YQPNRQQHLQGANSIQSAGPQNIGLRPLNSSSQTSNLGSYEQLLQQYQQPKAQSPFGLQQ
MSSATQPYGDHGLKPILGGRTPPDPYGLLGLLGVIRTNDPDLSSLALGIDLTTLGLNLNS
PDNLYKTFGSPFSNEPAKGDPEYPTPACYVAEQPPALQPMHFQKFQTLILFYIFYSMPKD
EAQICAANELHNRGWFYHKEAQQWFTRIPNMEPIVKTPTYEQGSFAFFHQGNWETVRKDN
FVLHYELVEKRPSLPSASQIVR
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcttgctgaattcaaatcttaacagttccgcatcaaatcttccagactcaacc
ggacgaccatttgcaacatccttttctggtcaatctggatcagttcaaggtctccatcac
tctggtctgcgcaacattcatggaaatttcagtcttccaagtatgcctggatcacttgca
caaaggaatgctgtgatgagcggccttccatcctccggggttcaacaacctggagggagc
atttctggcagatttgcttcaaacaaccttccagttgccatgtctcagattcctcatgca
cattcaggtgtcagtggtagaggaatgaatgttggtggaggtcaagcatttagtagtggc
atgaatatgggtggtaccattcaaggtttatactcaaatttgggcaccagtggtaatcga
aattctgttcctggcatgtcagtgtctccagctttaggaaacttgggtccacgtattaca
agctccgcaggaaacatcgtgggtggaagtaacattggaagaagcataagctctggtgga
ttgtcggtgccgagtatctcatcacgcatcgattttagtagcaatgctggaagtggaaga
ctaaatgtgcaaggatccaacaggataatgaacggccttaatcctcaaggatcatcacaa
ctgatcaatatgattggtaattcatacccaacgtctggaggttcattatcccagaaccaa
atgcaaccaggaaataattctctaggttccatggggatgctacatgacgccagtgacagc
actccattcgacatcaatgatttcccccaattgactggtcgacctaattcagctggtggt
ccgcaaggacaatatggatcactacggaagcaaggagttggtgttaactccattgttcaa
caaaaccaggagttcagtattcagaacgaagatttcccggctttgccaggatttaaaggt
agcagttcagattatgctatggagttaaatcacacggaacaacttcacgagaatgtacct
gtaatgcaaggacaacaatatcccatggcaaggtccgttgggtttaatttaggaaatagc
taccaaccaaatcgtcagcaacatctgcagggtgctaattcaattcagagcgccggacct
caaaatattggactaagaccactaaactcttcgagtcaaacttctaatttgggatcatac
gagcaactgctccagcaataccagcagccgaaggctcagagtcctttcgggttgcagcag
atgtcttcagccacacagccatatggggatcatggtctaaagcccattctgggaggccga
acaccacctgatccatacggcttgttgggattgctgggagttataaggacgaatgatcct
gatttgtcatctcttgctttgggaatagatttgacaacgttgggtttgaatttgaactca
ccagacaatctgtacaagacatttggctctccattttcaaatgagccagcaaaaggagat
ccagaatatcctactccagcttgttatgtggctgagcaacccccagcactacagcctatg
cattttcagaaatttcagacactcatactgttttacatattctacagcatgccgaaggat
gaagctcaaatatgtgctgccaatgaactacataatcgtggatggttttaccataaagaa
gcgcagcaatggttcacaagaattcccaacatggagcctattgtcaaaactcctacatat
gaacaggggtcttttgccttctttcatcaaggcaattgggaaacagtccgtaaggataac
tttgttctccattatgagctagtagagaaaaggcctagtctcccttccgcgtcccaaatt
gttaggtga
DBGET
integrated database retrieval system
