Triticum urartu (red wild einkorn wheat): 125529396
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Entry
125529396 CDS
T08232
Name
(RefSeq) 5'-3' exoribonuclease 3-like isoform X1
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03008
Ribosome biogenesis in eukaryotes
tua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125529396
09123 Folding, sorting and degradation
03018 RNA degradation
125529396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tua03021
]
125529396
03019 Messenger RNA biogenesis [BR:
tua03019
]
125529396
03009 Ribosome biogenesis [BR:
tua03009
]
125529396
03016 Transfer RNA biogenesis [BR:
tua03016
]
125529396
Transcription machinery [BR:
tua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125529396
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
125529396
Ribosome biogenesis [BR:
tua03009
]
Eukaryotic type
Pre-60S particles
RNases
125529396
Transfer RNA biogenesis [BR:
tua03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
125529396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
125529396
NCBI-ProteinID:
XP_048549766
UniProt:
A0A8R7VB15
LinkDB
All DBs
Position
Unknown
AA seq
1054 aa
AA seq
DB search
MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVQVPVDTSKPNPNGLEFDNLYLDMNGIIH
PCFHPEDRPSPTTFAEVFQCMFDYIDRLFIMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR
AAKDAADAAEEEEKLREEFEREGRKLPPKLQSQTCDSNVITPGTEFMAVLSVALQYYIHR
RLNYDPGWKQIKVILSDANVPGEGEHKIMSYIRGNRNLDGFNPNTRHCLYGLDADLIMLA
LATHEVHFSILREVVFTPGQQDKCFLCGQVGHLAAKCEGKAKRKAGEFDEKGDEIVPKKP
YQFLNIWTLREYLEYEFRMPNPAFETDIERIIDDFIFMCFFVGNDFLPHMPTLEIREGAI
NLLMAVYKKEFPNMGGYLTDACTPDLNRVEHFIQAVGSYEDKIFQKRARLHQRQAERIKR
DKAQAKRGDDLDPHVRGDLIVPVARFQGSRLASGAVASPYEHNGRSTEKGSQAKKARVSS
SDSSLSAAVVEAEISVEAQARENKEDLKSMLKVALRDKSDLFNSENPEEDKIKLGEPGWR
ERYYEDKFGARTPEQIEEIRRDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL
KGLGQLNITFELGSPFKPFDQLMGVFPAASSHALPVQYRQLMTDPSSPIIDFYPIDFEVD
MNGKRFSWQGIAKLPFIDEARLLSEIKKVEHTLTPEEARRNSTMYNMLFVNGAHPISPYI
YSLSSKFGHLPDNERNEIKEELNPEASGGMNGYISLCGGDPSPPVFRSPVDGLEDIMDNQ
VICSIYKLPDPHKHIARPPPGVIIPKKIVEAGDLKPPPVLWHEDNGRRPYDNNRKHCDNS
SRQNPAGSIQGRQLGEAAHRLVANSLNVRGGGQYPPARPYQTIMNGMQHYPNGMPPRMEQ
PAGRSGWHVPSDNLPNGQAPAYAQPSGHQYTRDNRGRQQPYARDSHSDSRGAGRHPSGYH
QNSSNAYSSHTAPPSSGFGRYGQPPSYAGGYAAGVYQPAPYAGAQQWQQQPPHSSYSGGG
APAARPNSRPQQSQNRYSNLDRTSNRRPPGQGRY
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcccggcgttctaccgctggctcgcggagaagtacccgatggtggtggtggac
gtggtggaggaggagcccgtggagatcgagggcgtccaggtccccgtcgacacctccaag
cccaaccccaacggcctcgagttcgacaacctctacctcgacatgaacgggattattcac
ccctgcttccaccccgaggacaggccctcgccgacaacattcgctgaggttttccagtgc
atgtttgattacatagataggctctttatcatggttcgccctcggaagcttatgtacatg
gccattgatggtgtggctcctcgtgctaagatgaaccagcagcgctctagacgattcaga
gctgcaaaagatgctgctgatgcggctgaagaggaagaaaaactgcgtgaagagtttgag
agggaaggaagaaagcttcctccaaaactgcaatcacaaacatgtgattctaatgttatt
actcccggcacagagtttatggctgttctatcagttgctttgcagtactacatccaccgc
agattgaattatgatcctggatggaaacaaattaaagttattctttctgatgccaatgtt
cctggtgaaggggaacataaaatcatgtcctatattcgtggcaataggaaccttgatgga
tttaacccaaatacccgacattgcctgtacggcctggatgcagatctgatcatgttagct
ctagcaacacacgaagtgcacttctccatactgagagaggtggttttcacacctggacag
caggacaaatgcttcttgtgtggtcaagttggacatctagcagcaaagtgtgaaggaaag
gcaaaacggaaagctggggagtttgatgagaagggtgatgaaatagtaccaaagaaacct
taccagttcttgaatatatggaccctgcgagagtacctagaatacgagttccgaatgcca
aatccagctttcgagactgatattgaacgcatcattgatgatttcatcttcatgtgcttt
tttgttggcaatgattttcttccacacatgccgacactagagattcgtgagggagctatt
aatttgttaatggctgtatacaagaaggaatttcctaatatgggtggctatttaactgac
gcttgcacgcctgatctgaatagagtcgaacacttcattcaagcagttggttcatacgag
gataaaatatttcagaaaagagctcgtttgcaccagcgtcaagctgaaagaataaaacgt
gataaagcccaagcaaagcgaggtgatgatctggatccccatgtaaggggtgatcttatt
gtacctgttgcacgtttccaaggatctcgccttgcctctggggctgtggcttcaccatat
gaacataatggacgtagcacggaaaagggcagtcaagctaagaaagcacgtgtatcatct
tcagattccagcctttctgctgctgttgttgaagctgaaattagcgttgaagcacaggca
cgtgaaaacaaagaagacctgaagtcaatgcttaaagttgcacttcgtgataaatcagat
ctttttaattctgaaaatcccgaggaggacaagataaagcttggagaaccaggatggaga
gaaaggtattatgaagacaagtttggggcaagaacacctgagcaaattgaagaaatacgt
agagatgttgttctcaaatatactgaaggtttgtgttgggtaatgcactactattatgaa
ggtgtctgctcatggcaatggttttacccttatcactatgccccttttgcttcggattta
aaaggtttaggccagcttaatataacttttgaacttgggtcaccattcaaacctttcgat
cagcttatgggagttttcccagcggcgagctcacatgcactccctgtacagtatcggcaa
ttgatgaccgatcctagttcgccaataattgacttttatccgattgattttgaagtagat
atgaatggaaagaggttttcttggcaggggatagctaagctgcccttcattgatgaagct
aggttgctgtctgagattaaaaaagtcgagcatactttgacgcctgaagaagcaaggcga
aacagtacaatgtacaatatgctttttgtgaatggcgcacacccaatttcgccttatatc
tactctctcagcagcaaattcggacatctgcctgataacgagcgaaatgaaattaaagag
gaactcaatcccgaagctagtggaggaatgaatggttacatctcactttgtggtggggat
ccaagtccgcctgtctttagatctcctgtggatggactggaggatattatggacaatcaa
gtgatatgctcaatttacaagcttccagaccctcataagcacatagcacgtccacctcct
ggtgttatcatacccaagaagattgttgaagctggtgacctgaaaccaccgcctgtgctg
tggcatgaagacaatggcaggaggccttatgacaataacaggaagcattgtgataacagc
agcaggcaaaaccctgcaggatcgatacagggccgccaactaggggaggctgcacaccga
ctagttgcaaacagcttgaatgttcgcggtggcggacaataccccccggctaggccatat
caaactataatgaatggtatgcagcattatccaaacggaatgccaccaaggatggagcag
cctgctggacgttctggttggcatgttcctagtgataatctacccaatggtcaggcacca
gcctatgcgcagccatcaggtcatcagtatacaagagataatcgcggaaggcaacaacca
tatgcgagagacagccacagtgattcaagaggagcaggccggcatccatctggataccat
cagaatagtagcaacgcatattcatcacatactgctcctccgtcatcgggttttggacga
tatgggcaacccccctcgtatgctgggggctatgctgctggggtctaccagcctgcacca
tatgcaggagcccaacagtggcagcagcaaccacctcatagttcctattctggaggtggg
gcgcctgctgctagacctaattcacgaccgcagcagtcacagaaccgctacagcaactta
gataggacttcaaacaggagaccaccaggtcagggccgctactag
DBGET
integrated database retrieval system
