KEGG   Triticum urartu (red wild einkorn wheat): 125529775
Entry
125529775         CDS       T08232                                 
Name
(RefSeq) protein transport protein SEC13 homolog B-like
  KO
K14004  protein transport protein SEC13
Organism
tua  Triticum urartu (red wild einkorn wheat)
Pathway
tua03013  Nucleocytoplasmic transport
tua04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tua00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    125529775
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    125529775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tua03019]
    125529775
   04131 Membrane trafficking [BR:tua04131]
    125529775
Messenger RNA biogenesis [BR:tua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     125529775
Membrane trafficking [BR:tua04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    125529775
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    125529775
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    125529775
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_Vps41 ANAPC4_WD40 Beta-prop_EIPR1 WDR55 Beta-prop_TEP1_C WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_WDR3_2nd WDR90_beta-prop_4th Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd
Other DBs
NCBI-GeneID: 125529775
NCBI-ProteinID: XP_048550149
UniProt: A0A8R7VGC0
LinkDB
Position
Unknown
AA seq 317 aa
MSSKKIELDHKDMVHDSAIDYYGKRLATASSDSTVKITSIGGASAPSQLVATLTGHYGPV
WRVGWAHPKYGSILASCGYDGRVIVWKEAATGQWSQLHVFDNHKASVNSIAWAPYELGLC
LACGSSDGTISVISMRPDTGGCDAATIERAHPVGVTAVSWAPAAALGSMVGSDQLVHKIV
SGGFDCVVKVWEFVNGGWKLESALVSDMHKECVRDVSWAPVLGLAKSTIASASQDGKVVI
WTSGKGGGKWEGKLMRDFEAPVWRVSWSLTGNILSVAAGEGDITLWKESSDGQWESLWTK
ASEEPPQEEQAIEEAMQ
NT seq 954 nt   +upstreamnt  +downstreamnt
atgtcgtcgaagaagatagagctagaccacaaggacatggttcatgattctgccattgac
tactatgggaagcgccttgccacagcctcctctgactccactgtgaagatcaccagcatt
ggaggtgcatctgccccgtcccagcttgttgcgaccctcactggccactatggtcctgtg
tggcgtgtcggatgggcccatcccaagtatggttccattctcgcatcctgcggctatgat
ggccgtgtgatagtctggaaggaggctgccactgggcaatggtctcagctccatgtgttt
gacaaccacaaggcctcagttaactccattgcttgggctccatatgaacttggcctttgc
cttgcctgtgggtcttctgacggcaccatctctgtcatctccatgcggcctgatacagga
ggatgtgacgctgcaaccattgagcgggcgcaccctgttggcgtgacagcagtctcctgg
gctccagcagcagcactcgggtccatggttggctcagatcagctcgtccacaagatcgtg
tctggtggctttgactgtgtcgtcaaggtgtgggagtttgtcaatggtggctggaagctg
gagagcgctctggtctccgacatgcacaaagagtgtgtgagagatgtatcatgggcaccg
gtcctgggcctggcaaagtccaccatcgccagcgcgtcccaagacggcaaggttgtcatc
tggaccagtggcaaaggaggaggcaagtgggaaggaaagctcatgcgtgacttcgaggct
ccggtgtggagggtgtcctggtccctgacgggaaacatcctgtccgtggctgccggcgag
ggcgacataactctgtggaaggagtcgtcagacgggcagtgggagtcgctgtggaccaag
gcctcagaggagccgccgcaggaggagcaggcgatcgaggaggccatgcagtag

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