Triticum urartu (red wild einkorn wheat): 125530882
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Entry
125530882 CDS
T08232
Name
(RefSeq) LOW QUALITY PROTEIN: exosome complex component csl4
KO
K07573
exosome complex component CSL4
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125530882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125530882
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125530882
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
125530882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
125530882
NCBI-ProteinID:
XP_048551259
LinkDB
All DBs
Position
Unknown
AA seq
201 aa
AA seq
DB search
MAATAMEHDGGAEVVVTPGELLGPSSSLEAGRGAYADGRPLRAAVRARRRRFVAPAPGSS
DLRSTVEVVGHKAHGAVPQPGSIVIARVTKVMARMASADIMCVDSKAVKEKFTGMIRQQD
VRATEIDKVYMYQSYRPGDIVRALVLSLGDARAYYLSTAKNELGVVSAQSIAGGTLVPTS
WTEMQCELTGQIEQRKVAKVE
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacggcaatggagcacgacggcggcgccgaggtggtggtcaccccgggggag
ctcctcggcccctcctcgtccctcgaggccgggcgcggcgcctacgccgacggccgcccc
ctgcgcgcggcggtccgcgcccgccgccgccgcttcgtggcccccgcccccggctcctcc
gacctgaggtccacggtggaggtggtcgggcacaaggcgcacggagccgtgccgcagccg
gggagcatcgtcattgcccgtgtgacaaaggttatggctagaatggcgtctgcagatata
atgtgtgttgactcaaaggctgtcaaggaaaagttcactggcatgataaggcagcaagat
gttcgtgcaactgagattgacaaggtgtatatgtaccagtcatatcgacctggcgatatt
gttagagctctggttctctctcttggtgatgcaagggcatactacctttcgactgccaag
aatgaacttggagttgtttctgcccaaagtatagcgggtggtacgctggtcccaaccagt
tggactgagatgcaatgtgaattgactggccaaatcgagcaaagaaaagttgcaaaagtg
gagtag
DBGET
integrated database retrieval system
