Triticum urartu (red wild einkorn wheat): 125532366
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Entry
125532366 CDS
T08232
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03018
RNA degradation
tua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125532366
09123 Folding, sorting and degradation
03018 RNA degradation
125532366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125532366
03041 Spliceosome [BR:
tua03041
]
125532366
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125532366
mRNA degradation factors
5'-3' decay
Lsm complex
125532366
Spliceosome [BR:
tua03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
125532366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF7130
Motif
Other DBs
NCBI-GeneID:
125532366
NCBI-ProteinID:
XP_048552404
LinkDB
All DBs
Position
1:complement(579964955..579967162)
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AA seq
99 aa
AA seq
DB search
MASVGPTLESLVDQVISVITNDGRNIVGTLRGFDQATNIILDESHERVYSTKEGVQQLVL
GLYIIRGDNIGVVGEVDEELDAALDMSKLRAQPLKPVIH
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtggggccgacgctcgagtccctcgtcgaccaggtgatctccgtcatcacc
aacgacggccgcaacatcgtggggactctgcgcgggttcgaccaggccaccaacataatc
ctcgacgagtcccacgagagggtctactccactaaggagggagtacagcagcttgtcctc
ggtctgtacatcatcaggggtgataacataggcgtggtgggtgaggtggacgaggagctg
gacgcggcgctggacatgtcgaagctgagagcgcagcccctcaagccagtcatccactga
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