Triticum urartu (red wild einkorn wheat): 125536817
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Entry
125536817 CDS
T08232
Name
(RefSeq) pre-mRNA-processing factor 39-2 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
tua
Triticum urartu (red wild einkorn wheat)
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tua03041
]
125536817
Spliceosome [BR:
tua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125536817
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
TPR_14
HAT_Syf1_CNRKL1_N
TPR_10
Motif
Other DBs
NCBI-GeneID:
125536817
NCBI-ProteinID:
XP_048556046
UniProt:
A0A8R7TH31
LinkDB
All DBs
Position
2:complement(209366305..209392484)
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AA seq
1180 aa
AA seq
DB search
MLGPPGTVDMEAEPEAAAALVALGLEPSASQLDVFKSRLHLLIDGNTSDFDTWVSLISSA
EETSVNDIRVISLVYDTFLLEFPLCHGYWIKYAAHKARLCTYDDVVGVYEQAVQAVPHCT
DLWVSYCGFAMSAYEDPALVRSLFERAMSLVGKDYLCYHLWDKYIEFENSQKQLIQLATI
YINMLKFPTKKLYKYYGSFKKLVTSLEQEVTHCGAEISSENLHTSEAMESEESEGYISTK
VARLFDQGGHLKPEVLKQYLFAGERFYQRSSELDKEICGFEASIKRPFFHVKPLDDDQLE
NWNLYLDFVEKNGDFDWAVKLYERCLIPCANYSEFWIRYAEYVDAKGGREIANYALGRAS
SCFVKGVPSFSMYYSMFKEQIGDAPGARALFVEGSSNSTSDFCMNINRLANMEKRMGNTK
AATEIYENAIQDAMQKQNTEVLPDLYTNFAQFKYAASHSIGEAKEVFVKGIKQAPCKPLI
KGFIQFMSTYGGSTEIPLLDSVIANAVIPGSGVSTALSLEDREDISLLFLKFVDLYGSVQ
ELRKAWARHSKLFPHNTRNLSQRHCTTDCNKRRITEFLRVAHDCSPEGRITLKQSSKSET
CSWQVDKEVGSQVDMDAVNSGGQGYDDEQNIGTVDAQQEVGDTAHGQHSLDKYGIQSQMF
SHANQDISHDLTVCEQIDQTTICQASVSEKAAQAESCNHDSPSNSIADPKQIDVQDKIKA
IELNAVDHHPGAVCSRSEPSSGTSLLKGSPSGPTPIFLELENKQLEKIQVKLETEHDVSV
SNAKPESSSDNPEATQCGTEVSALSQDHIQSSQTQDLSVGAKPSSSEMATTQITTCSQFS
PDNAVTAQAPLQHHMDNSQTYQSINLFLAGQNMQQMQQQGPAYAISQNVHTSPHSQVHLV
AQPNQGNQQYMEMMQGYASQMWQYYQQQLYHLQTQHNQQIQSLQQQQLPTEHLQQSFTQQ
VQQLNQQMVLWQQQVQQQQQQQQHAQQVQQQSDKTQGEYHSGDTKGEQNKHQQQESGIDQ
SQQFQQQQQLLYFQQQQQMYFIQQQQQMYQQQQQQQQQLMQQQQYLSQMPQQKQDMEQQQ
ELFQQQQQQLYDQQQKQMVVLQQQQQEFAQQQMQQYLQQQANQQVFKDQNGELNHQDARK
RQLEHGQQSEASQSDVSKLRSDEQSELSYPSTPQSQRSSH
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgctagggccgccggggacggtggacatggaggcggagccggaggctgcagccgcgctc
gtggccttggggttggagccctctgcgtcgcagctcgatgttttcaagagcagacttcat
ttattgattgatggaaatacgagtgattttgatacgtgggtatcattgataagttctgca
gaggaaacttctgttaatgacataagggttattagcttggtctacgataccttcttattg
gaatttcctttgtgccacggctactggattaaatacgcagctcataaagcaaggttatgt
acatatgatgatgtggtgggggtttatgaacaagccgtccaagcagtacctcattgtact
gatctttgggtcagttactgtggatttgctatgagtgcgtatgaagaccctgcccttgtt
agaagcttatttgagagggctatgtctcttgttggaaaggattacttgtgttatcacctt
tgggataagtacatagagttcgagaattctcagaagcagctgattcagcttgctaccatt
tatattaacatgttgaaatttcccacaaagaagctgtacaagtattatgggagttttaag
aagttggtaacatcattggaacaagaggttacacattgcggtgctgaaatatcatcagaa
aatttacatacttctgaagcgatggaatctgaggaatcggaagggtatatctcgactaaa
gttgctcgcttgtttgaccaaggtgggcatcttaaacctgaagtactgaagcagtactta
tttgctggggagcgtttctaccaaaggtccagtgaactcgacaaagaaatctgtggcttt
gaggcatccatcaaaaggcctttttttcatgtcaagccacttgatgatgaccaacttgaa
aactggaacctgtatcttgactttgttgagaagaatggcgattttgattgggctgtaaaa
ctttatgagagatgcttgatcccctgcgctaattattctgagttttggattcgctatgct
gagtatgttgatgccaaaggtggcagagagattgcaaactatgctcttggtcgagcctcg
tcgtgttttgtgaagggagtcccgtctttcagtatgtactattcaatgttcaaagagcaa
attggtgatgcaccaggtgctcgtgctctttttgttgaaggaagcagtaattccacttca
gatttctgcatgaatattaatagactggccaacatggagaaacgcatgggaaataccaaa
gcagctactgagatatatgagaatgcaattcaggatgccatgcaaaagcagaacactgaa
gtactaccggacctgtacactaattttgcgcaattcaaatatgcggcaagtcatagcatt
ggtgaagctaaagaagtctttgtcaagggaataaaacaggcaccctgcaaaccattgatt
aagggattcatacagttcatgagtacatacggaggatctacagaaatacctctgcttgat
tctgttattgctaatgccgtgattcctggatctggcgtatcaacagctttaagccttgaa
gaccgtgaagatatctcgttgttgtttctaaagtttgttgacctttatgggagtgtccaa
gaactcagaaaggcatgggctcgacacagcaaactttttcctcacaacacaaggaacctg
tcacagcggcactgtactactgactgtaacaagaggagaataactgaatttctgagggtt
gctcatgactgttctccagaaggcagaatcacattaaaacagtcatctaaaagtgaaact
tgttcttggcaagttgataaagaagtcggttcgcaagtggatatggatgctgtcaattca
ggaggacagggatatgatgatgagcagaacatcgggacagttgatgcgcaacaggaggtt
ggcgatacagctcacggccaacacagcttggacaagtatggaattcaaagccaaatgttt
tcacatgctaaccaagatatcagtcatgatttaactgtatgcgagcaaattgaccagaca
acaatatgtcaggcttcggtaagtgagaaagccgctcaagctgaatcatgcaatcatgat
tctccttcaaattcaattgctgatcccaagcagattgatgttcaggacaagattaaggcc
attgagctaaatgcagttgatcatcatccaggagcagtatgctcaagatctgaaccatca
tctgggacaagcttactcaaaggaagtccgtccggtccaactccaatatttttagaatta
gagaataagcaacttgagaaaatccaggtaaagctggaaacagagcatgatgtgtctgtc
agtaatgcaaagccagagagctctagtgataatccagaagcaactcaatgtggtacggaa
gtctctgcactcagtcaagaccatattcagtcttcacagacacaagatctgtcagtcggc
gcaaaaccttccagctcagaaatggcaacaacacaaattaccacgtgctctcagttttct
cctgacaatgcagtgactgctcaagctccccttcagcaccacatggataattctcaaacg
taccaatccattaacctttttctagctggacaaaacatgcagcagatgcagcagcaaggg
cctgcttatgcaatttctcagaatgttcatacatccccacattctcaagttcacctcgtc
gcacaaccgaaccagggaaaccaacagtacatggaaatgatgcaagggtatgcatcccag
atgtggcaatattaccagcaacagctgtatcacctgcagactcagcataatcagcagata
cagagtttgcaacagcagcagcttccaaccgagcatctccagcaaagctttacgcaacag
gtacaacaactaaaccaacaaatggtactttggcagcaacaggtccagcagcagcaacaa
caacaacaacatgcacaacaagttcagcaacagtctgacaaaacacagggtgagtatcac
tcaggggatactaaaggtgaacaaaataaacatcagcaacaagaatctggaattgatcaa
agccagcagttccagcagcagcagcaactgctttatttccagcagcagcagcagatgtac
tttatacagcagcaacagcaaatgtaccaacaacaacaacagcaacagcagcagttaatg
cagcagcaacagtatctctcgcagatgccgcagcagaaacaagacatggaacaacagcag
gagctctttcagcagcaacagcagcagctttatgatcaacaacagaagcagatggtagtt
ctgcagcagcagcagcaagagtttgcccaacaacagatgcagcagtacctgcaacagcaa
gcaaaccaacaagtgttcaaggatcagaatggcgagctaaatcaccaggatgcaaggaag
aggcagctggagcatggtcaacaatctgaagcatcacagagtgatgtttccaaattgcgg
agtgatgagcaatctgagttgtcctacccatcgactccacagtcccaacgttctagtcat
tga
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integrated database retrieval system
