Triticum urartu (red wild einkorn wheat): 125536887
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Entry
125536887 CDS
T08232
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125536887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tua03041
]
125536887
Enzymes [BR:
tua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125536887
Spliceosome [BR:
tua03041
]
Complex C
Other components
Step II factors
125536887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
Flavi_DEAD
AAA_24
SLFN-g3_helicase
AAA_30
ResIII
AAA_16
nSTAND3
T2SSE
NB-ARC
Sigma54_activ_2
AAA_7
ABC_tran
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
125536887
NCBI-ProteinID:
XP_048556136
UniProt:
A0A8R7PF31
LinkDB
All DBs
Position
2:complement(225689945..225697606)
Genome browser
AA seq
1263 aa
AA seq
DB search
MSSDGRLDLDATTSTLGPEDDTAQGLILPTKDKVMYRPPPGRSALGLDLLAHKKREKEGN
NSFKRPPEKVVTAASSMDEDERPGSTENDASSLSGGDRGSVARRYRGTNSSEKTLSKEST
VTDENERGLTPRHRDESHRQQTPASRYELNDDRGSRDKRGERETSASIGYSSSGRQGYRD
DRESNSRRNERSRSTSIDYTNKRSRDDYSSRSSRTPARSDWDSGRWEWEDTPRREYRDDR
PGSQRHYPTRSPMLAAASPDARLVSPWLGGNTPRSAASPWDHVSPSPAPVRASGSSKGSS
YSSSSGRSHQLTFSNDAEADRSPSAADRNYEITEEMMQEMDYNADRAWYDCEEHNTVFDG
DNYAADDSSYKKKEAQLPKKLTRKDGSLMTLSQSKKLSQMTADNAQWEDRQLLRSGAVRG
TEVQTEFDDEDERKVILLVHDTKPPFLDGRVVYTKQAEPVMPLKDPTSDMAIIARKGSVL
VREIREKQSQNKSRQRFWELAGSNLGNILGVEKTSEQVDADTAVVGDQGEIDFKEEAKFS
QHLKEKAEAVSDFAKSKSLSQQRQYLPIYTVRDDLLQVVRENQVVVVVGETGSGKTTQLT
QYLHEDGYTTTGVVGCTQPRRVAAMSVAKRVSEEMETELGDKVGYAIRFEDVTCSSTIIK
YMTDGVLLRETLKDADLDKYRVIVMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSAT
LNADKFSKFFGGVPVFNIPGRTFPVNILFSKTPCEDYVEAAVKQAMTIHITSGPGDILIF
MTGQEEIEATCYALAERMEQLISSSTKNVPKLSILPIYSQLPADLQAKIFQKAEEGTRKC
IVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQVFPCSRAAADQRAGRAGRTG
PGTCYRLFTESAYQNEMLPNPVPEIQRTNLGNVVLLLKSLKVENLLDFDFMDPPPQENIL
NSMYQLWVLGALNNVGGLTEIGWKMVEFPLDPTLAKMLLMGEKLECLDEVLTIVSMLSVP
SVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYLQWKSNQYRGDWCNDHFLHVKGLRKA
REVRSQLLDILKALKIPLTSCHMEWDVVRKAICSAYFHNSARLKGIGEYVNCRNGMPCHL
HPSSALYGLGYTPDYVVYHELVLTTKEYMQCVSAVDPQWLAELGPMFFSVKDTDTSLLDH
KKRQKEEKTAMEEEMEKLRQEQAEAALVEKERERRKRAKQQQQISMPGLKKGSTYLRPKK
MGL
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgagttccgacggcaggctggacctcgacgcgacgacaagcaccctcggcccggaggat
gacacggcgcagggtctgatactgccgaccaaggataaggtcatgtaccggcctccgccg
gggagatccgcgctaggtttggacctgctcgcacacaagaaaagagaaaaggaaggtaac
aattcatttaagcggcctcctgagaaggtagtgacggctgcttcttctatggatgaagat
gagaggccaggatctacagaaaatgatgcaagcagcctgtccggtggtgaccgtggcagc
gtggctcgccgttatcgaggaaccaattccagtgagaaaacattgtcgaaagaatctaca
gtcactgatgagaatgaaaggggtcttacacccagacatcgagatgaatcccatcggcaa
cagacccccgcctctaggtacgaactgaatgatgacagaggatcccgtgacaaacgtggt
gaacgcgagacatctgcatccattggttatagtagcagtggaaggcaaggataccgtgat
gacagggaatcgaatagtaggcgtaatgaacggagcagatctacatctatcgactacaca
aacaaaagaagtcgggatgactatagctcgagaagctcaagaacacctgcaagatctgac
tgggacagtggccgatgggaatgggaagatacacctcgccgggagtaccgtgatgatcgt
cctggctcccaaagacattatccaacacgatctcctatgctggctgctgcatctcctgat
gcacgattggtgtctccttggctaggtgggaatacaccccgttccgcagcatccccttgg
gatcatgtttctccctcacctgctcctgtgagggcttcaggttcatcaaaagggtcttcg
tattcaagttccagtggaagatctcatcagcttaccttttcaaatgatgctgaagctgat
agaagcccctcagctgctgataggaactatgagattaccgaggaaatgatgcaagagatg
gattataatgctgaccgtgcttggtatgattgtgaagaacacaacactgtgttcgatggt
gataattatgctgcagatgatagctcctacaaaaagaaggaagcacaattgcctaagaaa
ttgactcgtaaagatggtagtctgatgaccctttctcagagcaagaaattatcacagatg
actgctgataatgctcagtgggaggacagacaattgttgaggtctggagctgttagagga
acggaggtgcagacagaatttgatgatgaggacgagcgtaaagtaatacttcttgttcat
gatacaaaacctcccttcctggatgggcgagttgtatacacaaagcaagcagagcctgta
atgccactgaaggatccaacatctgatatggctatcattgcacgaaaaggttctgttttg
gttagggaaattcgtgaaaagcagagccagaacaagtcgcggcaacgcttctgggagctt
gctggatctaatcttggaaatatattgggcgttgagaaaacgtctgaacaggttgatgca
gatactgctgttgttggtgatcaaggggagattgatttcaaggaggaagcaaagttttcg
caacacttgaaggaaaaagcagaagctgtcagtgattttgcaaaatctaaatctctttct
cagcaaagacaatatcttcccatatatactgttcgagatgacctgctacaggttgtgcgt
gaaaatcaagtagttgtggtcgttggtgaaactggttctgggaagaccactcaacttact
cagtatctgcatgaggatggatataccacaactggtgttgttggctgtactcaaccgaga
cgtgtggctgccatgagtgttgccaagcgggtcagtgaagaaatggaaaccgaactgggt
gataaagttggatatgctatccgatttgaggacgtcacttgttctagcactataataaag
tatatgacagatggagtgcttcttcgtgaaaccttgaaagatgctgaccttgataaatat
cgtgttatcgtcatggatgaagcacacgaaagatccctcaatactgatgttttgtttggc
atattgaagaaggttgttgcacgtcggcgggattttaagctaattgtcacatctgcaacc
ctaaatgcagacaaattctcaaagttctttggaggtgtgcctgtatttaacattccaggc
aggacatttccagtaaatatcttgtttagcaaaacaccatgtgaagattatgtggaagcg
gcagtgaagcaggccatgacaattcacataacgagtggccctggagacatcctcatcttc
atgaccgggcaggaagagatcgaggctacttgctatgctcttgctgagcgcatggagcag
ctaatatcgtcatccacgaagaatgtacccaagctctccatcttgccgatttactcgcag
ttgcctgctgacttgcaggccaagatctttcagaaggcagaagagggcactcgcaaatgc
attgttgctaccaatattgctgagacgtccctcacagtggatggtatcttctatgtcatt
gataccgggtatggaaagatgaaggtatacaatccacggatgggcatggatgctcttcag
gtttttccgtgtagtcgagcagctgcagaccagcgtgcaggacgtgctggaagaaccggt
cctggcacatgctacaggctgttcacagaatcagcttaccagaacgagatgctccctaac
cccgtgccagagattcaaaggactaacctgggaaacgtggttctcttactgaagtccctc
aaagtcgaaaacttgcttgattttgacttcatggacccacccccccaggagaatatcctc
aactccatgtaccagctctgggtgttgggcgccttgaacaatgttggtggacttacagaa
ataggttggaagatggtggagttcccattggacccgactctagcaaagatgcttctcatg
ggggagaagctggaatgccttgatgaagtattgaccattgtatccatgctctcagtaccc
tcagttttcttccggccaaaagatcgagcagaggagagcgatgccgcaagggaaaaattc
tttgtcccagagtctgaccacctaacactcctgaatgtatacctgcagtggaagtcaaac
caatatcgaggagactggtgtaatgaccatttcctccatgttaagggtctccgtaaggct
cgggaagtgagatctcaactgctagacatactgaaagccctgaagatcccactgacatca
tgccatatggaatgggacgtggtgaggaaagctatctgctcggcgtacttccataactcg
gcaaggttgaagggcataggagagtatgtcaactgccggaatgggatgccgtgccacctg
catccgagcagtgctctgtatggtctcgggtacacccctgactatgtggtgtaccacgag
cttgtcctgacaaccaaggagtatatgcagtgtgtgagcgcagtggatccgcaatggctg
gcggagctgggtcctatgttcttctctgtgaaagacacggacacctcccttctggaccac
aagaagagacagaaggaggagaagacggccatggaagaggagatggagaagctgaggcag
gaacaggcggaggcagcactcgtggagaaggagagggagcgacggaagagagccaagcag
cagcagcagatctctatgccgggtctgaagaaaggttcgacatatctgaggcccaagaag
atgggtttgtag
DBGET
integrated database retrieval system
