Triticum urartu (red wild einkorn wheat): 125537038
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Entry
125537038 CDS
T08232
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125537038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tua03021
]
125537038
03041 Spliceosome [BR:
tua03041
]
125537038
03036 Chromosome and associated proteins [BR:
tua03036
]
125537038
Transcription machinery [BR:
tua03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
125537038
Spliceosome [BR:
tua03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
125537038
Complex B
125537038
Complex C
U2 SnRNP specific factors
125537038
Chromosome and associated proteins [BR:
tua03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
125537038
TFTC complex
125537038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
125537038
NCBI-ProteinID:
XP_048556291
LinkDB
All DBs
Position
2:complement(279755557..279769293)
Genome browser
AA seq
1361 aa
AA seq
DB search
MESSASGDGSSATTAAVAAAAAVASSSSGPSTSASAFSAGVSGGASATHYLAKRVLHGSA
VQHVARGHFRSEHLWEIVLCKGTSLELVVVGEDGVLQSICEQSTFGIVKDVGVLDWRFKH
FGIWPEIEGKEILVLLSDSGKLSLLYFCCQMHRFIPIGNIELSKPGNMRDQLGRILAIDH
DSAWVAISAYEDAFAVVRVGRTQHVYGPNKEIVEKAKIVHAVYKTSDIRGTVWSMCFMRT
RCSMDEYYPVVAMIINRKGSDANDLSMYALAANDGGIQYLSGYSEPGPLALEIAEIPQLD
GFGLLFRAGDILIVDLRDPKDICCTIRISMTGSLVGEQISVEDSCRGLDVDDDVAACALL
ELRDSGNNIMMDDSYMAIDGADNPGSMKSRVICSWSWEPDAVRGQPRLIFCLDDGEFHIL
EFNWDTEGLKVLPERVHRGLPCKPLLWMDRGMIAGFVEMGDGMILHLEHGRLVHRSTVQN
VGPILDLAIADYHGEKQDQLFSCCGMCPEGSLRVIRNGVNVEKLLRTEPIYQGVTGLWTL
RMKKTDTYHSFLVLAFVEETRILSVGLSFKDISDAVGFQTEVCTLACGLIADGLLVQIHS
KGVKLCLPTSYAHPEGATLTSPVCVDWYPDVTISVGAVGHDVVAVATSNPCCLYILRVRP
LSSLQYELYETQHVQLQYEVSCISIPEEDLRLRTSSSAFGGDFRKRKGNNSAAEVDVRMF
AVIGTHKPSVEVISLEPDEAFRLLSIGSISVNNALGAPVSGCIPENVRFVASERFYILAG
LRNGMLLRFESGTSKDQYLPGSFYKESFAPSLNALLQLVAIRHIGITPVGLVPLHDSANS
DIIVLSDRSWLLYASRHSLAYSSISFLPASHVTPVSSVDCPSGLLFVAENCLHLVEMVHG
KRLNAQKFSVGGTPRKVLYHSDSRTLLVMRTGLTGASCSSDIVQIDPNNGILLSRFKCEL
GETAKCIQIAKIGSEQVLIVGTSKSTDRPMMPNGEAESSIKGRLIVLSLDTLGSPHECSS
FIPTSNLSSSSHTGSFPEIVGYANEDFSSNSMCSSPDDICYNQIQFEQIAGHLRSLTHVT
FTGAVLAVYPYLDRYVLAAAGNTLSVFGFVNENPHRMKKYAVSRTRFTITCLKTYASQIA
AGDCRDGVLFYSYHENLRKLELVYADPAQRLVGDVVLLDCETAVVSDRRGSISVLSCPGL
EVSESPEKNLAVQCSFFMGEIAMSIQKAAFKYRLPIGDETDPVLESAYNCVVASTLLGSV
FVMIPLTSEEHQLLQDVQERLSLHPLTAPILGNDHAEFRRRGIPSGVPSILDGDMLVQFL
ELTSEQQQTVLDDGSSVKAPHRSISVFQVMRMLERVHYALN
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atggagtcctccgcctccggcgacggctcctctgccacgacggctgctgttgctgcggca
gcagcggtggcgtcgtcctcatcgggcccctccacctctgcctccgccttctccgccggt
gtctcgggtggggcaagcgccacccactacctcgccaaacgcgtgctccatggcagcgcc
gtgcagcacgtcgcccggggccacttccgctcggagcacctttgggagatcgtcctctgc
aagggaacttcacttgaattagttgtggttggtgaggatggtgttttacagtcaatctgc
gagcaaagtacatttgggattgtaaaagatgttggtgtcttggattggcgctttaaacac
ttcggtatctggcctgagattgaagggaaagaaattctggttctactctctgattctgga
aagctttctcttctttacttctgttgtcagatgcataggtttattccaattggaaatatc
gagttatctaaaccagggaatatgagggatcaactgggaagaattttggctatagaccac
gactctgcttgggttgctattagtgcgtacgaggatgcatttgctgttgtgcgtgttgga
aggactcagcatgtttatggtccaaataaagaaattgtagagaaggcaaaaatcgtgcat
gctgtatataagaccagtgatatccgcggtacggtttggagcatgtgcttcatgaggact
cgctgctcgatggatgaatattacccagttgtggcaatgataattaacaggaagggctct
gatgcaaatgacttgtcaatgtatgcactagctgccaacgatggtggtatccagtaccta
tctggttactcagaacccggacctttggcgcttgagatcgctgaaattcctcagctggat
ggctttggacttctatttcgtgctggtgatattctaattgtggatcttagggacccaaag
gacatctgctgtaccattagaataagcatgacaggcagtctggttggagaacaaatcagt
gttgaagattcatgtcgaggattagatgttgatgacgatgttgctgcttgtgctttgcta
gaactgagagattctggaaataacataatgatggatgacagttacatggctattgatggt
gctgataacccaggaagcatgaaatcaagggttatttgctcatggagctgggagccggat
gccgtgcgaggacaaccgaggctgatcttttgcttggatgatggagaatttcatattctg
gaatttaattgggatacagaaggattgaaggtattgcctgagcgtgtccataggggtttg
ccttgtaaacctcttttatggatggacagaggaatgatagcagggtttgtagagatggga
gatggaatgatccttcatcttgaacatggtagactggtgcatagaagtacagttcagaat
gtaggaccaatattggatttagcaattgctgactaccatggtgagaagcaggatcagttg
ttttcatgttgtggaatgtgccctgagggatcattgcgtgttataaggaatggtgtcaat
gtggagaaacttctgaggactgaacctatttatcagggtgttactggtttgtggacattg
agaatgaagaaaactgatacatatcactcttttcttgtattggcatttgttgaggaaaca
agaatactatcagttggactgagttttaaggacatcagtgatgctgtgggatttcagact
gaggtttgcactttggcatgtggtttaatagctgatggtttacttgtgcaaattcacagc
aaaggcgtaaagctttgtttgcctacatcatatgctcaccctgagggtgccaccttaact
tctccagtttgtgttgactggtatcctgatgtcactatcagtgttggtgctgttggacat
gatgttgttgctgttgctacatcaaatccttgttgcctatatattctcagggtcagacca
ttatcttcactccagtacgagttgtatgagacacagcatgtccaattgcaatatgaagta
tcttgcatatccattccggaggaggacttgagacttagaacgtcatcttctgcttttggt
ggtgattttaggaagagaaaagggaataattctgctgctgaagttgatgttcgcatgttt
gctgtcattggaactcataaaccttctgtggaagtcatctcattggaacctgatgaagca
tttaggctgctctctattgggtctatatcagtgaacaatgcgctcggtgctccagttagt
ggctgtatacccgaaaatgttcgttttgtagcatctgagaggttctacattctcgcaggt
ctaagaaatggcatgctactcaggtttgagtcaggaacaagcaaagaccagtatctccct
ggttccttttacaaggagtcttttgcaccttctcttaatgctctccttcagttggttgct
ataaggcacattggaattacccctgtaggcttggtaccattgcatgattcagctaattct
gatattattgttctcagcgataggtcttggctgttatatgctagtagacacagcttggca
tattcatccatctcatttctgcctgcgtcccatgtgactccagtatcttctgtggattgc
cccagcggcctgctatttgttgcagagaactgtttacatttggttgaaatggttcatggc
aaaagattaaatgcacaaaagttttcagttggagggactccaaggaaagtgctataccac
agcgatagtagaacactgttggttatgagaactggtttaactggtgcatcatgttcttca
gatattgtccaaatagatcctaataatgggatcttgctttcccgattcaagtgtgaactt
ggtgaaactgcaaaatgcatccagattgcgaaaataggaagtgagcaagtgttaattgtt
gggacaagtaaatctactgaccggccaatgatgccaaatggcgaagcagaaagcagtatc
aaaggacgcctaattgttctaagtttggatactcttggaagtcctcatgagtgcagttca
tttattccgacttctaatttgagttcctcttctcatacgggctcattccctgaaattgtt
ggatatgcaaatgaagatttctctagcaacagcatgtgcagcagtcctgatgatatttgc
tacaatcagattcaatttgaacaaatagcaggacacctgagatcactgactcatgttacc
ttcactggtgcagttcttgctgtatatccatatctagatcgatatgtgttggcagcagct
ggtaatacgctttctgtatttggttttgtgaatgaaaatcctcatcgtatgaagaagtat
gccgtgagtagaacacgatttactattacttgtttgaagacatatgcatcacagattgca
gcgggcgattgtcgtgatggtgttctcttctattcttatcatgagaatcttaggaagttg
gaacttgtttatgctgatcctgctcaacgattggtgggtgatgttgtcctgttagactgt
gaaactgctgttgtgtcagatcgtcgtggtagcatatctgtattatcctgccctggactg
gaagtttctgaaagtccagaaaagaacttagctgtacaatgttcattttttatgggcgaa
atagctatgagcatccagaaggctgcatttaagtatcggctccctattggtgatgagaca
gacccagtgttggaatcagcttataactgcgttgtggcgagtactttgctggggagtgtc
tttgttatgattcctctcaccagtgaggagcatcaactgttgcaagatgtccaagaaaga
ctttcacttcacccgttgactgctccaatcttgggaaatgaccatgcagagtttcgtcga
cgtggtatcccgtcaggagtgccttcaattctggatggtgacatgctggtgcaattctta
gagctcaccagtgagcaacagcaaactgttcttgatgatgggtcttcagtaaaggcacca
cacaggtctatctccgttttccaggtcatgcgaatgttggagcgggtccactatgcgctg
aactga
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integrated database retrieval system
