Triticum urartu (red wild einkorn wheat): 125538737
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Entry
125538737 CDS
T08232
Name
(RefSeq) SWI/SNF complex subunit SWI3A homolog
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125538737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tua03021
]
125538737
03036 Chromosome and associated proteins [BR:
tua03036
]
125538737
Transcription machinery [BR:
tua03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125538737
Chromosome and associated proteins [BR:
tua03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125538737
PBAF complex
125538737
GBAF(ncBAF) complex
125538737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Sharpin_PH
Acid_phosphat_B
BVU_2266-like
Motif
Other DBs
NCBI-GeneID:
125538737
NCBI-ProteinID:
XP_048557970
UniProt:
A0A8R7TJJ7
LinkDB
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Position
2:559119702..559125807
Genome browser
AA seq
557 aa
AA seq
DB search
MSPAAAGAASSGEAPPSRQPYTIPASSGWFRWDDIHETERQALPDFFGGAGGTGFGTASR
NPRIYREYRDYIINKYREDPARRLTFTEVRKALVGDATLLRKLFGFLDASGLINFSATSS
RPAAQQPGPGAVVEAPLGLQVTPRPPASYFVEERLGGVTGDGPLRLPQLTSYTDVFGEWT
PGKGPICGFCGDECKDGKVETLKDGFKVCSTCCKTNSAKKEEANKCSIVKKESSDNHASS
AWTDAETLLLLEGVLKHGDDWDLITQHVRTKNKTECIARLIQLPFGEHMLGNINNGKSDS
RFHTNQTTDGKTNHFIVKEASSQSADMVDGMQIDGEEDGADKLVEDHPSKRRRLCSSIDV
TSSLMEQLALLTTAVSPDVVAAAAAASIKALGNENPQAKKAFHLSEKEYQVKSFSSNHVQ
ESDCNVGNKEAEMHGQTVPDKKTEKNFISTAYQVRAAVGTAVGAAAARAKMLVDQEEREM
ELLMASIIETQLRKIQYKIKHFEELELIMDQEYTTIQQIKESLMKEWQTVLERAFQTGAP
LQRDEVLTRLFLDRSTP
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccggcggcggccggcgccgcctcctccggcgaggcgccgccgtcgcgccagccc
tacaccatccccgcctcgtccggttggttccgctgggacgacatccacgagacggagcgc
caggcgctcccggacttcttcggcggcgccggcggcaccggcttcgggacggcgtcgcgg
aacccccggatctaccgcgagtaccgcgactacatcatcaataagtaccgggaggacccc
gcccgccgcctcaccttcaccgaggtccgcaaggcgctcgtcggcgacgccacgctcctc
cggaagctatttggcttcctagacgcctccggcctcatcaacttctccgccacctcctcc
cgccccgcggcgcagcagcctgggccgggcgccgtcgtagaggcgcccctggggttgcag
gtgacgccacgcccgccggcgtcctacttcgtggaagagagattgggaggagtgaccggg
gacggcccgctccgcctccctcagctgacctcgtacaccgatgtgttcggggagtggacg
cctgggaaggggcctatatgtggcttctgcggcgacgagtgcaaggacggcaaggtggaa
accttgaaggatggttttaaagtatgttcaacgtgttgcaaaaccaatagtgcaaagaag
gaggaagcaaataaatgctctattgttaaaaaggagagctctgacaaccatgcttccagt
gcatggacagatgcagagacgctactccttttagaaggtgtcctaaaacatggagatgac
tgggatcttattacccagcatgtccgcacaaagaataaaacagagtgcattgctaggctt
attcagttgccttttggtgaacatatgctgggcaacataaataatggtaaatctgatagt
aggttccatacaaaccaaactactgatggcaaaacgaaccactttattgtgaaggaggca
tcaagtcagtcggccgatatggttgatggcatgcagattgatggggaggaagatggtgct
gataaattagttgaagaccatccttcaaagcgtcggcgtttatgttcttcaatagatgtc
accagttcattaatggagcagttagcactgctgactaccgcggtgagcccagatgttgtg
gctgcagctgcagccgcatcaattaaagcattgggtaatgaaaatccccaagcaaagaag
gcatttcatctcagcgagaaagaataccaagtcaaatcattctcttctaaccatgtccaa
gagagtgattgcaatgttggcaataaggaagcagaaatgcatggacagactgttcctgat
aagaaaacagaaaaaaactttatttctaccgcatatcaagtgagggcagctgttggaaca
gctgttggtgcagctgctgcccgcgcgaagatgcttgtggaccaggaagagcgagagatg
gagcttctaatggcgtccataattgaaactcagctaagaaagatccaatacaagatcaaa
cactttgaggagctagagttgatcatggatcaggagtacaccaccatacaacaaataaag
gagtccctgatgaaggaatggcaaacggtcctggagcgagcatttcagactggagcaccg
cttcagagggacgaagtgctcacaaggctgttcctggacaggtctactccatag
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