Triticum urartu (red wild einkorn wheat): 125540314
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Entry
125540314 CDS
T08232
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125540314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125540314
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125540314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Vps36-NZF-N
AAA_22
AAA_29
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
125540314
NCBI-ProteinID:
XP_048559877
LinkDB
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Position
2:736184370..736189672
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AA seq
716 aa
AA seq
DB search
MFVPKTDNQSDLEGPHRNSGPWLCSICSQQNDTSCISCEVCGVLRDLSLYFSNANEAESG
AKRRNKHSGVSVLARSLFTPSGPKLKAVVFPDGFQGNKNAAGHMQASLGTLHKTYMACKQ
RRDIVPFKFDVPSPDDMVSAGLKSSRHLRKAAPSVDFTRKEVMGDDDHVAVKDTSTDPSS
SVKLGGIGGTSSGFATDYCIMGKKVMDDNDILVEKDTSTDPSSSVKLDETLILDNELQHL
SIERKPKNSKAKIKKPVPVLQYKPEPWMLQGKDLEMPRQLNLAIVGHVDSGKSTLCGRLL
HALGRISKKQMHKNEKEAKEKGKGSFAYAWAMDESADERARGITMNVGVAYFDTKNYQVV
MLDSPGHKDFVPNMISGVTQADAAVLVVDASLGSFESGMGVNGVGQTKEHSQLIRSFGVE
NLIVAVNKMDSVEYSVERFNYVKSQLGIFLRSCGYKESAITWVPLSAMENENLVTAASDT
RLSSWFHGTCLLEAIDSSAAPHRDVSKPLRLPICDVISSHVLGQVAVCGKVVCGAIRSDS
KVLVMPSGELATVKIIERDSSRLSSARAGDNVAIGLQGIDPIHVMSGGVLCHPDYPVSVA
SSLELKILVLDIIVPILPGLQFELHAHHAKVSASLVRIVSLLDQKTGKASAKKPRMLTAR
QAAIIEVKLEREVCVEEFGTLKALGRAFLRSQGSTVAVGVVTRVVQAPEERAEQAS
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcctaaaacagataaccaatctgaccttgaggggccacatagaaattctggg
ccatggctgtgctccatttgctctcagcaaaatgatacgagttgtatatcttgtgaggta
tgcggcgttcttcgggatttgtcgctgtatttcagtaacgccaatgaagctgaaagtgga
gccaagcgcagaaacaagcattctggtgtatctgtactggcaagatctcttttcacacca
tccggtccaaaattgaaagctgttgtttttccggatggatttcaaggcaacaaaaacgca
gcagggcacatgcaggcttccttgggtactctgcacaagacatacatggcatgtaagcag
cgccgtgacatagtgcctttcaagtttgatgtaccatctcctgatgacatggtctctgca
ggcttaaaatcgtccagacatttgagaaaagctgctccatctgtagatttcacccggaag
gaggtgatgggtgatgatgatcatgtagctgtgaaggatacaagtacagacccaagttca
tcagttaagttgggtggaattggtggaactagtagcggatttgccactgattactgcatc
atgggaaagaaggtgatggatgataatgatattttagttgagaaggacacaagtacagac
ccaagttcttcagtgaagttggatgagactcttattttggacaatgagctacaacatttg
agtatagaaaggaagccaaaaaacagtaaagcaaagattaagaagccagtacctgttttg
cagtacaagccagaaccgtggatgctacagggcaaagatctagaaatgcctagacaacta
aatcttgctattgttggtcatgttgattctggcaaatcaacattatgtggtcgtttactg
catgccctggggagaatttcaaaaaagcaaatgcataagaatgagaaagaagcgaaagaa
aagggaaaagggtcatttgcatatgcttgggctatggatgagagtgctgacgaaagggca
cgtggcattacaatgaatgttggcgtagcatactttgacaccaaaaattaccaagttgtt
atgctcgactcccctggtcacaaagatttcgttcctaacatgatatctggagtgacgcaa
gctgatgcagctgtcctagttgttgatgcctctctaggatcattcgagtcgggtatgggc
gttaatggggttggacagacaaaggagcactcacagcttattcgaagctttggtgttgag
aacttgatagttgctgttaataagatggattcagtggaatattcggtggagcgcttcaat
tatgtgaaatcacaacttggcatttttctccgatcatgtggctataaagagtcggcgata
acctgggttcctttgagtgcaatggaaaatgaaaatctggtgacagcagcttcagatact
cgtctctcatcatggtttcatgggacttgccttctggaagcaattgactcgtcagcagca
cctcatcgtgatgtttcgaagccgctacggcttccaatttgtgatgtcatttcatcccat
gtgctggggcaagtggcggtttgtggtaaagtagtgtgtggagcaatccgaagtgattcc
aaggttcttgtgatgccttctggagagctagctacggtgaaaatcatcgagcgggactcc
tctcgtctcagctcggcaagagccggcgacaacgttgcgattgggctgcaagggatcgac
cccatccatgtgatgtctggtggagttctctgtcatccagattatcccgtgtcagtggcg
tcttccctggaactcaaaatcctggtactagacatcatcgtgcctatactgcctggcctt
cagtttgagctccacgcacaccatgcgaaggtgtcggcgtccctggtgaggatcgtgtcg
ctgctggaccagaagaccggcaaggcctcggcgaagaagccgcggatgctgaccgcgaga
caggccgccatcatcgaggtgaagctggagagggaggtgtgcgtggaggagtttggaaca
ctcaaggccctgggccgggcgttcctgcggtcgcaggggagcaccgtcgccgtgggcgtc
gtgacccgcgtcgtgcaggcaccggaggagcgagcagagcaggcttcttag
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