Triticum urartu (red wild einkorn wheat): 125540427
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Entry
125540427 CDS
T08232
Name
(RefSeq) uncharacterized protein LOC125540427
KO
K13126
polyadenylate-binding protein
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03015
mRNA surveillance pathway
tua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125540427
09123 Folding, sorting and degradation
03018 RNA degradation
125540427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125540427
03041 Spliceosome [BR:
tua03041
]
125540427
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125540427
mRNA cycle factors
Stress granule specific factors
125540427
Spliceosome [BR:
tua03041
]
Complex C
Other components
Complex C specific factors
125540427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_10
RRM_7
Nup35_RRM_2
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
125540427
NCBI-ProteinID:
XP_048560001
LinkDB
All DBs
Position
2:743977933..743982800
Genome browser
AA seq
973 aa
AA seq
DB search
MGRKSDLADQLQEDGMSAVAAEYEEGSEEEEEPFEREFYNDDDDDDSNGGEPETQAVDPC
EDPLAEEEEANEEKPCDGAAPLEDEESSYDEPFVDELCYGEEDSGEQDSYYAEPFTDQLC
EVEPCDVEVAHEEKFVKKKYSPVQAIKKEQNEEEVLKRTLRKGSSHEHKAVPVTDEIELK
PFKKRLSVRFATDVSCYTYSTESFGAARLEKRKAQFDDQDSHLCKRQEHTVSLPQDSVTL
KEVDDTNLYVGNLPTSVTSHKLIELFLPFGRIVRSKVADDRFTGVSQGYGFVKYAEPRSA
TTAIERMNGRLVDGKTLEVRVAAVPPSVSYPSMQAVSATCSLPSKEVDPCRLYVCNLPLS
MDTLKLLEHFLPFGKVTDIKVPRDQATGLSKGYGFVKYSDSHHAAQAITHLNGFLVEGKK
IDVRVAEVSSTRTIKEIDMANLYVCNIPASIDTDKLVALFSPFGKITHARVAADQGYGFV
KFANSQCAAEAIALMNGSLVEGETLIVRVAGLSPLASSSVVQGSPIPSPEMKKSRLYVTN
LPRSMNADKLVELFVPFGKISKVVINLEYSLVYYADAASVTTAVEHMDGYLIGGKSLVVR
RSDSCPTAAAAHAPLSSQSAGGTPTREIDMANLYVGGFPPTVTGDQLVELFRPFGRIVQS
RMFHGYGMVRYSDPLSAAAAIDEMDGYQIGASTLAVRVAGLPNLMPRVDCLTAPQVPPGN
EQKEVDLTNLYVGHLPLYITTERLTEIFLPCGQITQAKVVVDRHTGVSKGFGFVKFADTY
AAAAALSYMNGYPLEGHILAVRIANVHPNDMSSYMGRLYSQFKVPDPSTMAVGVPTSSYW
PPCYSAESAYAEDYRGQGTDAASSQTSQLPESVSASSSFAAERDWSPVSSHVADSSQQQP
SAGWAGPPGFEPLHAHAAVSPPPPVVPWAGPPGFEPHSIPKKEDGATATKPSQPCSKVHL
AESGGSQKRRSIV
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcaaaagtgacctggctgaccagctgcaggaggatggcatgagtgctgttgct
gctgaatatgaagaaggcagtgaagaggaagaagaaccatttgaacgtgaattctacaat
gatgatgatgatgacgacagcaatgggggtgagccagaaacacaagctgtggatccttgc
gaagatcctttggcagaagaagaggaggctaatgaagagaagccttgcgatggcgccgcc
ccacttgaagatgaggagtccagttacgatgaaccttttgttgatgaactctgttatgga
gaagaagacagtggtgagcaggactcgtattatgcggagcctttcacggatcagctctgt
gaagtggagccatgtgatgttgaggtggctcatgaggaaaagtttgtgaagaaaaagtac
agtcctgttcaggctatcaagaaggaacaaaatgaggaagaggtcctaaaacggacactg
agaaagggcagcagccatgagcacaaggcggtaccagtgactgatgaaattgaattgaag
ccgttcaagaaacgattgtctgtcaggtttgctactgatgtatcttgttacacatacagt
actgaaagttttggtgctgccaggttggagaaaaggaaagctcagtttgatgaccaggac
agccacttgtgtaagaggcaagaacacacagtttctttgcctcaggacagtgtcacgctg
aaagaagtggatgacactaacctgtatgtgggtaacctgccaacttctgtgacttctcac
aagctcatcgagctatttctaccttttggacgaattgttcgatcaaaagtggcggatgat
cgtttcactggtgtaagccagggatatggctttgtgaagtatgctgaacctcgtagtgcc
acaacagctattgaacgcatgaatgggcgcctggttgatgggaaaacattagaggttaga
gtagctgcagttccaccatcagtatcctatccatccatgcaggctgtgtcagcaacttgc
agtctgccatcaaaggaagttgacccgtgtaggctgtacgtatgcaacctccccttatcc
atggatacgctgaagctactcgagcattttctgcctttcgggaaagtaactgatataaag
gtacccagagatcaagccacaggtttaagcaaaggatatggctttgtgaagtactctgat
tctcatcatgcggctcaggccatcacccatttgaatgggtttctggttgagggtaaaaag
atagatgttcgagtggctgaggtctcttcaaccagaaccatcaaggaaatcgacatggcg
aatctatatgtctgcaacattcctgcatccattgacacagataagctggttgcacttttc
tcgccatttggtaagattacccatgcgagagtggctgcggaccaaggctatggctttgtc
aaatttgccaattctcaatgtgctgccgaggctattgcactaatgaatggatcactggtt
gaaggggaaactctaattgtcagagtcgcaggcctttcaccacttgcatccagctcagtt
gtacaaggctcaccaattccctcgccagaaatgaagaaatctagactgtacgtcactaac
cttccgcggtcgatgaacgctgataagctggttgagcttttcgtgccctttggtaagatc
agcaaggttgtgatcaatctggagtatagcctagtgtattatgcagatgcagcatcagtg
accacggctgttgaacacatggatgggtacctgattggtggaaagagtctagtagtcagg
cgatcagactcttgtccaaccgctgcagcagcgcatgctcctttatcatcacagtcagct
ggcggcacgcccacaagagaaattgacatggccaacttgtatgttggcggcttcccacca
acggtaactggcgatcagttggtcgagcttttccggccatttggacgaattgtgcaatcc
aggatgtttcatgggtatggcatggtgaggtacagtgatcctttgtctgctgctgctgca
attgatgaaatggatggttaccaaatcggagcaagtaccctggctgtgagagtagcaggc
cttcctaatctaatgcctcgggtggattgtctaacagcaccacaggtgcctcctggcaat
gagcagaaagaggttgacttgaccaacctatatgtaggccatctcccgctctatatcacc
accgaaaggctgaccgagatctttctgccatgcggccaaatcactcaagcaaaggtagtc
gttgaccggcacaccggagtgagcaagggattcggattcgtcaaattcgctgatacttat
gctgctgctgcggctctcagttacatgaacggttacccgctggaggggcacatcttggcg
gtcagaatagccaatgtccatccaaatgatatgagcagctacatggggcgtctctactcc
cagttcaaagtccctgatccctctaccatggcggttggagtgccaacatcgtcgtattgg
ccgccgtgctattctgctgaatcagcttacgcagaggattatcgggggcagggaactgat
gctgcttcttctcaaacgtctcagctgcctgaatctgtgtcagccagttcatcatttgct
gctgaaagggattggtctcctgtgtcaagccatgtcgccgacagctctcagcagcagcct
tcagcaggctgggccggtccgcctggcttcgagcccctccatgcgcatgcggcagtctct
cctcctccgccagtggtaccttgggctggcccgccaggctttgagccccattccatcccc
aagaaggaagatggcgccaccgcgactaaaccttcccagccttgctccaaggtccatctg
gcagagtcaggaggcagccagaaaaggcgttccatcgtctag
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