Triticum urartu (red wild einkorn wheat): 125540459
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Entry
125540459 CDS
T08232
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125540459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125540459
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
125540459
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
125540459
NCBI-ProteinID:
XP_048560035
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All DBs
Position
2:complement(747525409..747528754)
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AA seq
187 aa
AA seq
DB search
MVGASTSSVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQ
EHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVA
VWWRPNFETVMYPYCPPHITKPKECKKLFIVHLTEREYFAVPRNLKLLAVPLFELYDNVQ
VSGTPPC
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcgcctcgacgtcgtcggtggtgaacgtgtacccgctcgccaactacacgttc
ggcaccaaggagcccaagatggagaaggacacctccgtcgccgaccgcctcgcccgcatg
aaggtcaactacatgaaagaaggaatgcggacaagtgttgaagcaatcctactggtgcaa
gagcacaatcacccccacatactgttattgcaaattgggaacacgttttgcaaacttcct
ggtggacgtttgaagcctggagaaaatgaaattgagggcctgaaaagaaagttgtgcagc
aaacttgcagtgaactcaccttcctttccacctaactggcaggttggtgagtgtgttgct
gtttggtggaggccaaactttgaaaccgtaatgtatccttattgccctccacatataacc
aagcccaaggaatgcaagaagcttttcattgttcatctaactgaaagagagtatttcgct
gttccaaggaacttgaagctacttgctgttccactgtttgaactctatgacaatgttcag
gtaagtggcactcccccatgctga
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